| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0428 |
|---|
| Symbol | |
|---|
| ID | 4281374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 507903 |
|---|
| End bp | 508673 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638137316 |
|---|
| Product | (R)-hydroxyglutaryl-CoA dehydratase activator |
|---|
| Protein accession | YP_753137 |
|---|
| Protein GI | 114565983 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
|---|
| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.215923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATG TTGGCATTGA CATTGGATCA ACCGCCGCTA AAACAATTGT TTTTAACGGG
GAAAAGGTAA TTGCTTCTTT CGTTATGCCT ACCGGTTGGA GCAGTAAGGA AACTGCCGTA
CGTATAAAAG GCCAATTGGA ATCTTTGGGG TTTAATGTGG AATCCGCAGA TATAAAAACG
ATCGCCACCG GTTATGGACG CATTTCGGTT GAATATGCAG ATATGGTTTT GACAGAAATC
ACCTGTCATG GCAAAGGTGG CTACCATTTG TTTTCTCAGG ACGGCGTAAT CATTGACGTG
GGAGGTCAGG ATACCAAGGT TATTACCATA AAACATGGGA CGGTCTCCAA CTTCTTGATG
AATGATAAAT GCTCAGCCGG CACTGGCAAG TTTATTGAGA TTATGGCCAA TCGTCTGGCA
GTTGATATTG ACGAGCTTTT CAGCTTGGCT GAAGGCGGTA CGCCTATTCC GATTAGTTCC
ATGTGTACGG TCTTTGCTGA GTCGGAAATC ATTAGTCATA TTGGAGCTGG ACAGCCAAAA
ACAGATTTGG CCGCTGGTAT CGTGCAATCT GTAGTATCCC GGGTAGCTCT ACTGGTAGAA
CGGCACGATA TAAAGGGAAT CTGTATTTTA ACAGGGGGAT TAAGTCATAA CCAATACTTC
AGGAAACAAC TTGGCGAGAA ACTACGCCGA GAGATTCATA CTCATGATCT GGGTAAATAT
GCCGGCGCGT TGGGAGCAGC GCTTATAGCG GCAGATAAAT TCAAGCATTA A
|
|---|
| Protein sequence | MNYVGIDIGS TAAKTIVFNG EKVIASFVMP TGWSSKETAV RIKGQLESLG FNVESADIKT
IATGYGRISV EYADMVLTEI TCHGKGGYHL FSQDGVIIDV GGQDTKVITI KHGTVSNFLM
NDKCSAGTGK FIEIMANRLA VDIDELFSLA EGGTPIPISS MCTVFAESEI ISHIGAGQPK
TDLAAGIVQS VVSRVALLVE RHDIKGICIL TGGLSHNQYF RKQLGEKLRR EIHTHDLGKY
AGALGAALIA ADKFKH
|
|---|
| |