| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0306 |
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| Symbol | |
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| ID | 4281607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 366580 |
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| End bp | 368328 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638137194 |
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| Product | hypothetical protein |
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| Protein accession | YP_753020 |
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| Protein GI | 114565866 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAT CCGTTGATAG TTTCAATCTT TATAAAGTAT CGGAGGCTAT GCTGGATAAT
CCCTTTATGG CCTGCGTGGT TGTCGATGAG CACGGCATAA TTCGCTTTAT AAATCAAGCC
TACCTGGAAT GGTTGCACAA AGACAGAAAC GAAGTAATGG AAAAGCACAT TCTTGAAGTT
ACGCCCCATT CCAAATTACC CGAGGTTCTG CGCAGCGGGA AAAGTGATCC GCTTGACCTG
TGGACGGTTA ATGACCGTGA GACGATCATC ACTCGCTACC CATTGATTAA AGATGAGCAG
ACTATTGGGG CGGTGGGGCA AACTATTTTC CTGGATAAAG CCGGGGCGAA AATACTTATG
AAGAAACTGC AAACTATGGA AAAGGAGTAT GAAACGGTAT CAGAGGTGCT GGTGCAGAGT
CCGTACCTCA TATATGTGAT TGTAGATAAA GCGGGCAGTA TTACTTTTAT GAACCAGACT
TACCTGCACT TATTGGGGAT GAAAAAGGAA GATGTGGTGG GAAAGCACAT ACTGGACATA
ACCCCCCATT CTAAGCTGCC AGAAGTTTTA AGAACCGGTG ATATACACGA AATTGACACA
TGGACCGTCA ATGGCCGTGA CACCATTATT ACCAGAACCC CCATTATAAA GGATGGTGAG
ATTACCGGGG CGGTAGGGAG AAGTCTTTTT TTGGATATGT CCCAGGCTAA AATGCTTATA
AATAAACTGC AGGAAACAGC GAAAGAACTT AATTACTATA GGGAGGAGTT TCGCCAGCTT
TATCAAGCCC GCTGGCAATT TGATGATCTT ATAGGAGTTA ATCCCGAGTT TACAATGGTC
AAATCCATGG CCCAGCAATT AGCTCATACT AGATCTACCA TCCTAATAAC CGGGGAAAGC
GGAACCGGCA AAGAATTGTT TGCCCAGTCT ATACACAACC AGGGTGGACA GGAGGGGCCT
TTTGTACGGG TCAATTGTGC AGCTTTACCT GAAAACCTGC TGGAATCCGA GCTCTTTGGT
TATGAGGAAG GAGCTTTCAC TGGAGCTAAA AAAGGCGGCA AGCCTGGAAA ATTTGAGCTA
GCCAAAGGAG GTACCATCTT TTTGGATGAA ATAGGCGATA TGCCTATCGG TATGCAGACC
AAACTTCTTT CAGTACTGCA AGAACGGGTG ATTGAAAGGG TAGGCGGCAC TAATCCCATT
TCCATAAAAG TAAGAGTAAT TGCAGCCAGC AATCGCGATC TGGAAAAGAT GGTTGCTAAG
CAAGAGTTCC GGGAGGACCT TTACTACCGT TTGAATGTAG TACGTTTGCA CATCCCTCCT
TTGCGGGAGC GTATGGAAGA TATCCCCTTG CTCGTTAATT ACTTGATGGC TGGAATCAAT
ACCCATCTTA ATGCTAATGT GATGCATATT TCTAATGAAG CCCTGCATAT GCTGCAAAAT
TATAACTGGC CGGGTAATGT ACGCGAATTG CAGAACCTGC TGGAGCGTGC AATAAACCTG
GCTTCATTAA AGCAGGCCGC CTGCCTGGAG GTACAACATT TCCCCTCGTT AACTGGGGAA
GCACTTCCAC CCGCAGTAAG TGAAAATGGG CGTACTACCT TGAATGATTC GGTGCAAAGA
TTGGAGAAAG AGCTGATAGA GCAAACGCTG AAATCAACCA ATTATAATAA ATCTCAGACA
GCTAAAGAAT TGGGTATTAA CAAGTCGGTT TTATATAGTA AAATGCGAAA ATATGGCTTG
TTTGATTAG
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| Protein sequence | MSKSVDSFNL YKVSEAMLDN PFMACVVVDE HGIIRFINQA YLEWLHKDRN EVMEKHILEV
TPHSKLPEVL RSGKSDPLDL WTVNDRETII TRYPLIKDEQ TIGAVGQTIF LDKAGAKILM
KKLQTMEKEY ETVSEVLVQS PYLIYVIVDK AGSITFMNQT YLHLLGMKKE DVVGKHILDI
TPHSKLPEVL RTGDIHEIDT WTVNGRDTII TRTPIIKDGE ITGAVGRSLF LDMSQAKMLI
NKLQETAKEL NYYREEFRQL YQARWQFDDL IGVNPEFTMV KSMAQQLAHT RSTILITGES
GTGKELFAQS IHNQGGQEGP FVRVNCAALP ENLLESELFG YEEGAFTGAK KGGKPGKFEL
AKGGTIFLDE IGDMPIGMQT KLLSVLQERV IERVGGTNPI SIKVRVIAAS NRDLEKMVAK
QEFREDLYYR LNVVRLHIPP LRERMEDIPL LVNYLMAGIN THLNANVMHI SNEALHMLQN
YNWPGNVREL QNLLERAINL ASLKQAACLE VQHFPSLTGE ALPPAVSENG RTTLNDSVQR
LEKELIEQTL KSTNYNKSQT AKELGINKSV LYSKMRKYGL FD
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