| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0265 |
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| Symbol | |
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| ID | 4281279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 307690 |
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| End bp | 309075 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638137158 |
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| Product | sigma-54 (RpoN) |
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| Protein accession | YP_752984 |
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| Protein GI | 114565830 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAG TCCAGGATAT TTCTATTCAG CAGCAACAAA AGCTACTGAT GACGCCTGAA
TTGCGTCAGG CTATTGCAAT ATTACAGATG TCCACCCTGG AATTAAACGA GTATATTCAA
AGAGAGCTGG AAGAGAACCC TTTTTTAGAG GAGAAAGAGG CTGAGGAAAA CGGGGACTAC
GAAAAGGAGG CTGCTGATAA CAGCGAAAGC AAACTGGAAG ATTGGCTTGA ATACTACAAT
GACCGGGATA TTGGCTTTTT AAGTAGAGAA GCAGAAACAG AGAAGTCCTT TGAAAACTTT
TTTGCCCGGC GACCCAGCCT TTATGAACAT CTTGAATTCC AGCTGCGTTT GAGCTGCAAG
AATCGGGATG AGTTGGCAAT AGGGAACTAT TTAATTGGCA GTATTGATAG GAATGGCTAC
CTGGGTATCG ATTTAAAGGA ACTGGCATCT CATTTGGAGG TGAGCCTGGA ACAGGTAGAG
GAAGTTCTGG AGATGGTTCA TTCTTTTCAT CCCCACGGTG TTGGGGCTCG GGACCTGCCG
GAATGTCTTC TGCTGCAACT TAAGCATTAT GGCAAGGAGA GTTTTCTGGC TCGGATAATT
ATTGAACAGC ACATGGATGA CCTGGCCCGG GGCAGGTTAA ATAAAATAGC TCAGGCCCTT
ACGGTTCCAG TTCACCAGGT TCAGGAAATA TCGGACTTGA TCCGAACCCT GGATCCCCGG
CCCGGATTGC AGTATAGCAA TACTGATGAA ATTAAATATA TAATTCCCGA TGTATTTGTG
GAAAAAGTGG AGGGTGAGTA CATAATAATT GTTAACGATT TCCACTTTCC CCGTTTGATG
GTCAACCATC TCTATGAAAA CATCCTGCGT CAACCTGATT CCTTTCCCCA GGATACTAAA
AAATATATGG AGGATAAAAT GGGTTCGGCG ATATGGCTTA TTCGCAGTAT AGAACAGAGG
CGTATGACTC TGTATAAAGT GGCCCGTTGT ATTGTTGATA TCCAAAGCGA ATTCCTGGAC
AAAGGTATCG AGTATTTAAA ACCGCTTAAT CTCCGGCAAG TGGCAACAAT AGTTGATGTG
CATGAATCAA CAGTCAGCCG TGCCACTACC AACAAGTATA TTCAAACCCC ACAGGGCTTA
TTTGAATTGA AGTATTTTTT TGGGGCTGGT TTGGAGTCTT GTTATGGTGG AGAGAAGGTT
TCCAGCAAGA GTATTAAACG CAAGGTAGAG GAGATTATTG CCGAGGAAGA TAGCTTAAAG
CCCTTGAGTG ATGAAGCCAT TGCCAAGCTC CTGAAGAAAC GGGGTTATCG TATTTCTCGC
CGGACCGTGA CCAAATACCG TCAGGAAATG GGTATCCCGG CTACCACTGC ACGCAAAAGG
TTTTAG
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| Protein sequence | MKLVQDISIQ QQQKLLMTPE LRQAIAILQM STLELNEYIQ RELEENPFLE EKEAEENGDY
EKEAADNSES KLEDWLEYYN DRDIGFLSRE AETEKSFENF FARRPSLYEH LEFQLRLSCK
NRDELAIGNY LIGSIDRNGY LGIDLKELAS HLEVSLEQVE EVLEMVHSFH PHGVGARDLP
ECLLLQLKHY GKESFLARII IEQHMDDLAR GRLNKIAQAL TVPVHQVQEI SDLIRTLDPR
PGLQYSNTDE IKYIIPDVFV EKVEGEYIII VNDFHFPRLM VNHLYENILR QPDSFPQDTK
KYMEDKMGSA IWLIRSIEQR RMTLYKVARC IVDIQSEFLD KGIEYLKPLN LRQVATIVDV
HESTVSRATT NKYIQTPQGL FELKYFFGAG LESCYGGEKV SSKSIKRKVE EIIAEEDSLK
PLSDEAIAKL LKKRGYRISR RTVTKYRQEM GIPATTARKR F
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