Gene Swol_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0258 
Symbol 
ID4281272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp300546 
End bp301352 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID638137152 
Producthypothetical protein 
Protein accessionYP_752978 
Protein GI114565824 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATAG AACTGGTTGC AATTGACCTG GATGATACCC TGCTTGATTC TACCTGGAAG 
ATACCGGAAT CCTGTCTGGA AGCTATCAGC CAGGTGCAAA GAAAAGGAGT TAGAGTAACG
CTGGCCACCG GGCGCATGTT TCGCTCTGCC TTGCCTTATG CCCAACAGTT AAAGGTAGAC
ATACCTTTAA TTACCTATCA GGGAGCTCTG GTAAAGAATT CGTTTTCCCA GGAGGTTCTC
TATTATGAAC CACTGCCGCG CAAGCTGGCG GCGGAGATTA TGATATTTTT TAAAGAACGA
GGGATATTCT ACCAGAGCTA TTTTAATGAT TGTTTTTGTA TAGAGAGATG GAGCCCGGAA
GCCCAATATT ACGCGGAATT GTCCGGAATG GAGCCCTTGT TTTATGATGA CCTCATAGCT
GTTTCCCGGG AGCAAGATAC ACCCAAAATT TTAGCCAGCA TTTTTGATGA AAGGCTGATG
CTAGCCATAG AAGAGGAATT GAACCGGCGC TATGGGGAAG AATTGTATAT TACCCGTTCC
AAACCGGTTT TCCTGGAGGT AATGAAGCGT TCCGTTGATA AAGGGCTGGC TTTAAAGATG
CTGGCTCGTT ACTTTGGTAT CCCCCGGGAA AAGGTTCTGG CCTTTGGTGA CAGTTATAAT
GACCTGGCTA TGATAAAATG GGCCGGAATT GGTGTAGCCA TGGGCAACGC TCCGGAAGTA
GTAAAAGAAG CCGCTGATTA TCTGGCCCCT TCCAATGAGG AAGAGGGGGT AGCCCACGTA
TTGCATGAAT TAATACTTGA TAAATAG
 
Protein sequence
MSIELVAIDL DDTLLDSTWK IPESCLEAIS QVQRKGVRVT LATGRMFRSA LPYAQQLKVD 
IPLITYQGAL VKNSFSQEVL YYEPLPRKLA AEIMIFFKER GIFYQSYFND CFCIERWSPE
AQYYAELSGM EPLFYDDLIA VSREQDTPKI LASIFDERLM LAIEEELNRR YGEELYITRS
KPVFLEVMKR SVDKGLALKM LARYFGIPRE KVLAFGDSYN DLAMIKWAGI GVAMGNAPEV
VKEAADYLAP SNEEEGVAHV LHELILDK