| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0179 |
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| Symbol | |
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| ID | 4281328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 222632 |
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| End bp | 223636 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638137076 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_752902 |
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| Protein GI | 114565748 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.235811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGAA AGAAATATGC GGTTATTATC TTTCTGGTGA TGCTGCTGCT GGTGGCGATG
GGGATTTTCT ATGCCTATTT CTACCAGCAG CAGAAGGCCC TGGCAGACAG GAGGGAGAGC
CTGGCCGCTA CCGGTACGAT TGAGGCCAAA ACAATTATGA CTTCGTTTAA AGTACCGGGA
AGGATTGAAA CATTGCTGTT TGATGAGGGG GCGACGGTGG AGAAAGGCCA GGAGCTGGCG
GTGCTGGAGA CTCAGGAAAT CGAAGCTCGC TTGCTGCAGG CCGAGGGCAG TTGCCAGGCG
GCGGAAGGAC TGGCCGGGCA GGCGGAGAAG GCAGTATCTC TAACCAGCCA GACGGTTGAG
GCTAAAATTG CCCAGGCAGA AGCTAATTTG ACCAATTACC AGCAGAAATT CGACCGGGTC
AAGAGCCTGC ATGAAAGTGG GGCCATTGCC GACAGCCAGT TTGATGAAGC GGCCAATGCT
TTGAAGGCGG CTCAGGGCCA ATTGGATGAA GCTCGGGCCG GGAGGGAAAA GGTGGAGGTA
GCGCAGCAGG AGCATCTGGC GGCGGTGGGC AAGGCCCAGC AGGCCCAGGG TGTTCTGCAG
GAGGCGCAGA CAGCGATGAA TAATACTCGT CTTAAATCGC CTATCTCGGG ATACATAACC
CAGAAAGTAA TAGAAGAAGG GGAAATGTTG AATGCAGGAA CCCCGGTTTT CGAAATAAGT
GATTTAAAAC ATCCTTATGT TAAGGTTTTT ATTGACGAAA GGAAAATCGG GCGGGTATAT
CTGCAACAGG CGGTTGAGGT CAGGGTGGAT GCTTTTCCCA GAAAGGTATT TCCCGGCAAG
GTGGTATGGA TCAGTGATGC CGGTCAGTTT GCCGTACAGA AGGCGATAAA TGAGCAGTAC
AGCCACGATA TACGCAGTTT CGAAGTTAAG ATAGATTTAC CCAATGATGA TCTGGCGCTG
AAAACCGGTA TGACCGCCAG CGTGCAGTTT GCGGAGGGGA AATAG
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| Protein sequence | MARKKYAVII FLVMLLLVAM GIFYAYFYQQ QKALADRRES LAATGTIEAK TIMTSFKVPG
RIETLLFDEG ATVEKGQELA VLETQEIEAR LLQAEGSCQA AEGLAGQAEK AVSLTSQTVE
AKIAQAEANL TNYQQKFDRV KSLHESGAIA DSQFDEAANA LKAAQGQLDE ARAGREKVEV
AQQEHLAAVG KAQQAQGVLQ EAQTAMNNTR LKSPISGYIT QKVIEEGEML NAGTPVFEIS
DLKHPYVKVF IDERKIGRVY LQQAVEVRVD AFPRKVFPGK VVWISDAGQF AVQKAINEQY
SHDIRSFEVK IDLPNDDLAL KTGMTASVQF AEGK
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