Gene Swol_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0165 
Symbol 
ID4281809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp193994 
End bp196540 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content44% 
IMG OID638137062 
ProductWD-40 repeat-containing protein 
Protein accessionYP_752888 
Protein GI114565734 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.748884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGAA AGAAAATTTC AAAAACAGCA AGTGTACTTA CCCTGGTCTT AGTTTTCCTT 
GGAGTAGCAG CTTTTCCAAC GATGGCAAAG GAATGGAACC AGTATCTAAA TGGACCGCAA
CACCGTAGTT ATATTAATAT TACCGGTTTG CAGAACGAAC CGGAACTCAA GTGGCAGTAT
GAAATTACCG GTGAACCGGG TAATCCTGTA ATCGCTGATG ACGGTACCGT GTATGTTAGT
TCAGCCAGGA ATTATTACGG TGAGGAAAAT GCTGCTGCTA AAAACATATC AGATTTGCAC
CTTTATGCCT TCGACAAAAA CGGTACTTTA AAATTTGACA AGGTTTTATT AACCATGACC
TCTAATACTG ATGTTTTTTT GAGCGCGGCG CCTTTTAAAT TGTCAATAGG AAACAATGGG
GCGATATTTG CGGTTTCCTA TGACCCTAAT AACCGGAAGG GTTACATCTA TTCTTTTGAT
GCTTCCGGTC ATATAAACTG GGAAAAGACT TATGACAATA TAAGCCTGAG CGGCGAGCCG
GTTATTGGTA CAAATAATAC TATTTATGTT ACCGCTGGAA CTAACATGAT CTATGCGTTT
AACGGCAATA ATGGAACAGA GTATTGGAAT ACTGATATCG GCGGCGGTTA TTTGTATGGC
TGTACCCTTT CCAATGATGA GACCGTGCTC TACGCAGGAA ATGAGTGGGG GACGGTAAAA
GCAATCGATG CGGCCAATGG AAATATAATC TGGTCCAATA ATCATATGCA TACAGATAAA
ACTCCAGTTG TTGCTCATGA TGGGTCACTG TTGATTGCCA ATCATTATTA CAATCTATTG
TGCATGCTGA ACCCGGCAAC GGGACTAATG CTTTCGCCAG CCGAACTTAA GCAGGGGGCG
GGCCTGGGCG GTGAACCGGC TGTAAACCAG AATAACCAGG CTATTGCGCT GGAATGGAAA
GATGGCAAGG TATCCTGCTA CAATATACCT AATGGTCAAC AGAATTGGAC AGTAAGTGAT
ATTGGCACCC CATATCGCAG CCCCATTGTT GATGCCAACA GTAATATTTA TTTTGGGGCG
CAATCCAATA TTTACGCATT GAATGCAGCC GGGCAGCTGC TCTGGCAAAA GTCCATTATT
CCGAATAATG ATGGTTACCG TTACATGGCG TCAAACATGA TTATGAATCA AAGTGGTAGT
ATTTACTTTG CCGCCTGTGA TAGTTACAAT GGGAAGAATT ATTTTGTCTG TTATGGGGCC
GGCGGGGTGA ACCCTCCGGT AGAAAGCGTT GAAGCTCCAG TTTTTAGCCC GGCTGGAGGT
ACATACGCTG CGCCCCAGCA GGTAAGTATC AGCTCAGCTA CCAGCGGGGC TACCATCCGT
TACACCACCG ATGGTACTGA ACCGAGCGAC AATTCCATTA TTTATACAGT GCCTATCCAG
GTTGGCCATA GCCTGACCAT CAAAGCCAAA GCCAGCAAAA TCGGGATGAA CGACAGCATA
ACTACCAGCG CCAGCTTTAG CATTAATATC CCTGTAGATC CTGACGCCAT TGTTCTGGCT
AACCACTGGA TCAGTGGTGC AGCTTTTGAC TTTACCAAAG GCAAGGCTTT TAGCTTCTGG
GAAGGAAACC CGGAGCAGTA CAGTGATGAT CTGGAAATAG TCGGTAATCC GGCAGCTGTA
ATGTTAAGGG GAAATCTTAT TGACATGGGC AGTACTACTC TGGAGCAATT AATTACGCCT
CCCGCTTCCG GATATGAAGG TGAGATTCCT GCTGTTTCCG GCCATGCCTA CTGGGCTAAA
GTGGGTGATA ACTATTACAA ATTTGTAATT ACCAATATCG ATTTGACTAC TGATGCGAAT
GGTAATGTCA CTTCTATGAC CTTTAAGTAT CAAAAATATT CTGCCGTACC CGAGGTAAAA
GCCCCGGAAT TAAAGTTAGC GGAAATCACC ACCAAAGGCG ACCTGAGCCT GATTTTTGAT
CAGGTGATGG CTAATCCGTC GGGAACTCAT AATCAGTTTG CAGTAGAAGT GGATGGTAGC
AAAGTTCCAG TTACAACAGT AGAAAACACC AACACTCCGA CTAAGATAAA ACTGGTTCTT
CAAAACAAAG TTATTGGGGC CAGGAAAGTT TCCATCAAAT ATACCCGAGG TGAGGCTGCG
GGTGAGCAGA TCAAATCACT TGATGGGAGA ATAGTGGATA GTTTCATAGA AACCTGGGAG
GAATGGACTG GTCCTGGTAG TAAATCCAGC TATCAACCCT GGACCATTAA ATTCAGTCTA
GATGTTGATC CGTCATCAGT AAACGATAAT AACATATACA TTTTGGATAA AACCGGTATA
AAACTCGCTG CCAGTTTATC CATTCCGGAC AACAAAACCG TTACGCTAAC ACCCAAAACC
CCCTATACCT CAGGAGAAAG CTACATTCTT TACATCAGCA AATCTGTACG CTCCGCGGTA
GGAGTAAGAG CATACCTCAA GGAGAACATA CATATGAAAA TTACGGCGGT GCCAGGCAGT
GCGGCCGAGC TAGGCTGCAT CATATAA
 
Protein sequence
MIGKKISKTA SVLTLVLVFL GVAAFPTMAK EWNQYLNGPQ HRSYINITGL QNEPELKWQY 
EITGEPGNPV IADDGTVYVS SARNYYGEEN AAAKNISDLH LYAFDKNGTL KFDKVLLTMT
SNTDVFLSAA PFKLSIGNNG AIFAVSYDPN NRKGYIYSFD ASGHINWEKT YDNISLSGEP
VIGTNNTIYV TAGTNMIYAF NGNNGTEYWN TDIGGGYLYG CTLSNDETVL YAGNEWGTVK
AIDAANGNII WSNNHMHTDK TPVVAHDGSL LIANHYYNLL CMLNPATGLM LSPAELKQGA
GLGGEPAVNQ NNQAIALEWK DGKVSCYNIP NGQQNWTVSD IGTPYRSPIV DANSNIYFGA
QSNIYALNAA GQLLWQKSII PNNDGYRYMA SNMIMNQSGS IYFAACDSYN GKNYFVCYGA
GGVNPPVESV EAPVFSPAGG TYAAPQQVSI SSATSGATIR YTTDGTEPSD NSIIYTVPIQ
VGHSLTIKAK ASKIGMNDSI TTSASFSINI PVDPDAIVLA NHWISGAAFD FTKGKAFSFW
EGNPEQYSDD LEIVGNPAAV MLRGNLIDMG STTLEQLITP PASGYEGEIP AVSGHAYWAK
VGDNYYKFVI TNIDLTTDAN GNVTSMTFKY QKYSAVPEVK APELKLAEIT TKGDLSLIFD
QVMANPSGTH NQFAVEVDGS KVPVTTVENT NTPTKIKLVL QNKVIGARKV SIKYTRGEAA
GEQIKSLDGR IVDSFIETWE EWTGPGSKSS YQPWTIKFSL DVDPSSVNDN NIYILDKTGI
KLAASLSIPD NKTVTLTPKT PYTSGESYIL YISKSVRSAV GVRAYLKENI HMKITAVPGS
AAELGCII