| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0073 |
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| Symbol | |
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| ID | 4281707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 79300 |
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| End bp | 82521 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638136975 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_752801 |
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| Protein GI | 114565647 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTTTGC AAGAGAAATT TTGGGATTCA CTGTGTGGAG TTTTGCAAAA GAGGCAAAAC
ATTTTGTTAA CCGGACTTTC CGGAAGCGCT AAAGCCTTTA TGCTGAGCGA AATACTTAAA
AAGCAGAATC GAAAATTACT CTGCCTGTTG CCGGAGGAAG AGAAAGCCTA CGACCTGGCC
CGTGATTTGG AAGCATTTAT TGAGCCGGGG CGGCTATTCA TGTTTCTGGC TCGTGATTTT
TATTTTGCGA AGGAAAACCT GTCCACGCTT GAGGTAGGAA GAATTCTAAG CTTGCAGCAC
TGCCTGGATC ATCCCCGCCA AAGCGCCATT ATTATCGCTA CCCCCGGTTC TTTTATCTAC
CCATTACCAG CTCCCTCAGC TATGAGAGAG AGCAGCCTCT TGCTGCAACA GGGAAAGGAA
AAAGAACAGC GCGAAATACT GAAGAAGCTG GTGGGTGGTG GTTACCGCCG CGTGGATACC
GTCAGCCGGC AAGGTGAATT TGCCGTTCGT GGCGGCATAA TCGATATTTT CCCCCTCGGC
CACAAAGAGC CCTGCCGGGT AGAATTTTTT GGGGAGCTTA TCGAATCCAT ACATCGTTTT
GATATAAACA GCCAGAGAAG ATTAGGTAAA GACGAAGGAC AAGTGAAGAT TTTACCAGCC
GATGAACTTT ACGGAGATGA ATTGACTTGC AGCATTTTTT CTTACCTGGA TGAAAGCAGC
AGTGTATTTT TTGACGAGCC CCGGGAGTTT TATAAGCAAT TTAAACGCAG TGTTCGCCGC
TACCGGGAGT CCTTAAAAGA GGCCTGCAAG GATGGCAAAA TTATTCGAGA AATAAAGCTG
CTGGATAGTG AATACCTTAA AAAAGAAATA GAAGCCCATA GTGTAATATA CCATGCTTAT
TTTCCCTCCA CTATTCCCCA GGTAGCGGTA ACTTCGCTGC AGCATATTTC CCAGAAGGAA
ATGGAGCCTT TCTACCGGCA GTATGAAACC CTCTTTGCCC GGATAAATGA TTGGCAGGGT
AAGGGATTAA AGGTTATATT GGCGATAAAA AGCCGGGTAG CCCGGGAGCA GATACAGCAG
GATTTGCTGG AACAGGGCAT CACCGGGATA TCATATCTCG ACAAGATAGT GGAAAAGGGT
TTTAGCAGTT CCACCTTGCA GGTGGCGCTG CTTTCGGAAA GCGATATCTG GGGGAAAAAA
ACCGACCCCG GCAGCAGAAA AAAACATAAA CACAAGGGAG AAGAAAGAAT ACTTCTGGAA
GACCTCAAGC TCGGAGATTA TGTAGTTCAC GAGAGCTATG GCATCGGCAT ATTTCGCGGA
GTAAGCCAGG TGGAAAACAG CGGGATTACC CGGGAATATA TTCTCCTGGA GTATGCCGGA
ACCGACCGGC TTTACCTCCC CTTAGAAAAA CTGGATCTCT TATTTAAATA CACCAGCTCC
GGGGATAAGG AACCCCGTTT AAACAAACTG GGGGGAAGCG CCTGGGAGAG AACCCGGAAG
AAGGTAGCAC AATCAATTCA GGACCTGGCG GAGGATCTCC TGCAGCTCTA TGCCCATCGG
GAGAGCCGCG AAGGCTATGC CTTCTCCCCT GACACCCCCT GGCAGAGTCA ATTTGAGGAT
GAGTTCCCTT TTCGTGAAAC TCCCGACCAG CTCAAGGCTA TCAATGAAGT AAAAAAGGAC
ATGGAAACCC GGCGGCCCAT GGACCGGCTG GTTTGCGGCG ATGTGGGCTA CGGCAAAACC
GAAGTCTTCT TGCGAGCAGC CTTCAAAGCC ATTATGGACG GTAAGCAGGT GGCCATATTA
GTTCCTACCA CTGTACTCGC CGAACAGCAC TTTCAGACAT TTACGGAAAG ATTTGCCGCA
TACCCAGCAG TAATCGAGGT GCTTAGCCGT TTTCGCAGCA ACTCGGAGCA AAAGCGTATC
GTTGAGGATC TGCAAAAAGG GGTGGTGGAT ATCGTAATCG CTACCCACCG CTTGCTTTCC
CGCGATGTCA AGTTCAAAGA CCTGGGTCTT CTGGTGATAG ATGAAGAACA TCGCTTCGGA
GTAGCCCAAA AGGAAAAAAT CAAGGCCTTA AAAGAACTGG TTGATGTAAT AAGCCTTTCC
GCCACCCCCA TTCCCCGCAG TCTGCACATG GCCCTTACCG GCTTGCGTGA CCTCAGCGTA
ATAGAGACTC CTCCCCCCGA GCGTTACCCC ATTACCACCT ATGTCCTCGA ATATAACGAA
GAAATAATCG TGGAGGCGGT AATGAAGGAA ATCGAACGCC AGGGACAGGT ATTCTTCGTA
CACAATCGTA TCGAGGATAT CTACCGGGTA AAGGAACAGC TGGATGAACT CTTTCCCGGC
ATAAAGATAG CGGTAGGACA CGGCCGTATG AAAGAAGATG AACTCTCCCG GGTAATGATG
GACTTCGTTA ACGGCAAATA CCAGCTCTTT CTTTGCACTA CCATCATAGA ATCCGGCCTG
GATATGCCCA ATGTCAACAC CATAATTGTG GATGAAGCGG ATAAAATGGG CTTGGCTCAG
CTCTACCAGC TGCGGGGGAG GGTGGGGCGC TCCCATCGCC TGGCCTATGC CTATCTTACC
TACCGTCCCG ACTGGGTGAT AAGTGAAGCT TCGCAAAAAC GATTGAATGC TATTCGGGAA
TTCAATGAAC TGGGCTCCGG CATGAAAATT GCTTTGCGGG ATTTGGAAAT CAGAGGTGCC
GGCAACATCC TGGGAGCAGA GCAACACGGC TATATCCAGG CCGTGGGCTT TGACCTCTAT
TGCCGCTTGC TGGAGCAGGA GACCGGTCGC TTAAAGGGCG AGCAAGTTCA GGAAAACCGG
GTAGACCCCC AGCTGGATAT CGACATCGAT TATTATATTC CCGAAAGCTA TATACCTGAC
TCCGGCAGCA AGATGAGAAT ATATCGCCGT CTCCTGCTGG CCGGCAGCCA GGAAGAGGTA
GAGGAAATCC GGGAAGAAAT CCGGGATCGT TTCGGCCCCC TGCCCCAGGC AGTGGAGAAC
TTCTTGCAAA TAGCCGCACT GCGCCTCCTG GCCCGGGACA AAGAGATAAA GTCCCTGCGC
CGCAAAGGCC GGCAGATAGA GATACAGACC CTGCAGCGCC TGCCCGGCAA CCTGTCCGAG
CATCTCCGGG GCATCAGGAG AGTCAATGAC CACACCCTGA TCATTCAAAA ACATGAAAAC
AGCTCACTCC CAGCCCTGGC CGAGATTTTG CAAATGTTGT AA
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| Protein sequence | MLLQEKFWDS LCGVLQKRQN ILLTGLSGSA KAFMLSEILK KQNRKLLCLL PEEEKAYDLA
RDLEAFIEPG RLFMFLARDF YFAKENLSTL EVGRILSLQH CLDHPRQSAI IIATPGSFIY
PLPAPSAMRE SSLLLQQGKE KEQREILKKL VGGGYRRVDT VSRQGEFAVR GGIIDIFPLG
HKEPCRVEFF GELIESIHRF DINSQRRLGK DEGQVKILPA DELYGDELTC SIFSYLDESS
SVFFDEPREF YKQFKRSVRR YRESLKEACK DGKIIREIKL LDSEYLKKEI EAHSVIYHAY
FPSTIPQVAV TSLQHISQKE MEPFYRQYET LFARINDWQG KGLKVILAIK SRVAREQIQQ
DLLEQGITGI SYLDKIVEKG FSSSTLQVAL LSESDIWGKK TDPGSRKKHK HKGEERILLE
DLKLGDYVVH ESYGIGIFRG VSQVENSGIT REYILLEYAG TDRLYLPLEK LDLLFKYTSS
GDKEPRLNKL GGSAWERTRK KVAQSIQDLA EDLLQLYAHR ESREGYAFSP DTPWQSQFED
EFPFRETPDQ LKAINEVKKD METRRPMDRL VCGDVGYGKT EVFLRAAFKA IMDGKQVAIL
VPTTVLAEQH FQTFTERFAA YPAVIEVLSR FRSNSEQKRI VEDLQKGVVD IVIATHRLLS
RDVKFKDLGL LVIDEEHRFG VAQKEKIKAL KELVDVISLS ATPIPRSLHM ALTGLRDLSV
IETPPPERYP ITTYVLEYNE EIIVEAVMKE IERQGQVFFV HNRIEDIYRV KEQLDELFPG
IKIAVGHGRM KEDELSRVMM DFVNGKYQLF LCTTIIESGL DMPNVNTIIV DEADKMGLAQ
LYQLRGRVGR SHRLAYAYLT YRPDWVISEA SQKRLNAIRE FNELGSGMKI ALRDLEIRGA
GNILGAEQHG YIQAVGFDLY CRLLEQETGR LKGEQVQENR VDPQLDIDID YYIPESYIPD
SGSKMRIYRR LLLAGSQEEV EEIREEIRDR FGPLPQAVEN FLQIAALRLL ARDKEIKSLR
RKGRQIEIQT LQRLPGNLSE HLRGIRRVND HTLIIQKHEN SSLPALAEIL QML
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