Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0024 |
Symbol | |
ID | 4281363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 28889 |
End bp | 30394 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136921 |
Product | transposase (25) |
Protein accession | YP_752754 |
Protein GI | 114565600 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0619695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACGA TGATACAACA ATATCATATC AAACACTTAA ACTTTCATAA AGGCAAATCC CTTAGGAGTA TTGCCGAAGA GACCGGACAT GATTTCAGGA CTGTAAAAAA ATATGCAGAG CAAACCGATT TCAATGAAAT CCGAAAACCT AAAAGAGGAC GACCTTCGAA GCTTGACCCG GTAAAACCGA TAATTGACGC CTGGCTTAAA GAAGACCTGA ACCGGCCAGT TAAACAACGG CACACTGCTC GGCGCATCTA CGACCGGCTG TGTGATGAAC ATCAGGATAT ATTTAATGCT TGTGAAAGAA CTGTTCGCAC TTATGTATCT GCCAGAAAAA AAGAACTATA CGGTGAAGAA GAAGGCTACC TTCCCCTGGA ACACCCAGCA GGAGAAGCGC AGGTAGACTT CGGCGAAATC GTCATGATTG AGCAAGGCCA GAAAGTCAAA GGATATGAAT TAATTCTTTC GCTGCCGTAT AGTAATGCTG GGTATCCCCA GATATTTCGG GGTCAGAACC AGGAATGCCT GTTAACCGGA CTAAAAGACA TATTTGAATA TTTAGAGCAT GTTCCCCGGA TAATCTGGTT TGATAATATG TCAGCGGCAG TTGCTGGTAT TGGGGAAAAA GGAGAGCGGA AACTAGTAGA CCAATTTTAC CGCTTCGCCC TCCACTACGG CTTTAAGCCC CAATTTTGCA ACCCCGGTAA AGGGCACGAA AAAGGCCATG TTGAAAACAA GGTGGGTTAC AGCCGCAGGA ACTACTTTGT ACCCGAACCC AGTTTTAGTG ATATTGAAGA ATTTAACCAG GGACTTTTTG CCGTGGCTGA AAAAGACCAC TGTCGGAAAC ATTACCGTAA AGGCCGGGTA ATAAATGAGC TTCTCCAAGA TGACCTTACA GCCATGCTAC CCCTGCCGGC CAAACCATTT ACGATCGGCC GTATGCAGAA ATTATCGGCC AACAAATACG GCAAAGTCTG TGTTGATACA AACGTATATT CCGCATCACC CCAGGTGGCA AATAAAGAAC TATATATGAG GCTAGGTGCC CATCAGGTGG AACTATTAAA CGAACAATAC CAGCCTATCG TAAAACATAA ACGATTATAT GGCCAGAATC AGGAACTAAT GGATTGGCTG CCTTACCTAA CTACACTGGC CAAACGCCCT AATGCTTTGA AATATACTGG ATTTTATCGC GAACTACCTG ACCCCTGGCA GGACTATTTT AATAATCTGG ATTACGCGGA AAAAAAGAAG AGCCTAAATC TTTTAGTACG TATGATAACC GAAACAGATA TGGATACAGC AACCATATGC TTGCTGGAGA CATTAGATTC CGGCAAAGCA GATGCTGACA GTATCCTGTT AAGCTACCGC CGATTAACCG AACCAACCTT TAATGATTTT TTGCCGTTAT TATCTGCCGG CATAAATTCA CCGGCAATAT ATACTCCTGA TCTGACCTGC TATGATACTT TCCTGAAAGC AGGTGAGTGC AGATGA
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Protein sequence | MLTMIQQYHI KHLNFHKGKS LRSIAEETGH DFRTVKKYAE QTDFNEIRKP KRGRPSKLDP VKPIIDAWLK EDLNRPVKQR HTARRIYDRL CDEHQDIFNA CERTVRTYVS ARKKELYGEE EGYLPLEHPA GEAQVDFGEI VMIEQGQKVK GYELILSLPY SNAGYPQIFR GQNQECLLTG LKDIFEYLEH VPRIIWFDNM SAAVAGIGEK GERKLVDQFY RFALHYGFKP QFCNPGKGHE KGHVENKVGY SRRNYFVPEP SFSDIEEFNQ GLFAVAEKDH CRKHYRKGRV INELLQDDLT AMLPLPAKPF TIGRMQKLSA NKYGKVCVDT NVYSASPQVA NKELYMRLGA HQVELLNEQY QPIVKHKRLY GQNQELMDWL PYLTTLAKRP NALKYTGFYR ELPDPWQDYF NNLDYAEKKK SLNLLVRMIT ETDMDTATIC LLETLDSGKA DADSILLSYR RLTEPTFNDF LPLLSAGINS PAIYTPDLTC YDTFLKAGEC R
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