Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0014 |
Symbol | |
ID | 4281352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 18932 |
End bp | 20284 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638136910 |
Product | hypothetical protein |
Protein accession | YP_752744 |
Protein GI | 114565590 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000106215 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAGC AAGCGGCAAT AATTGCAGTG ATTATAGGCT TGGCTTTGCT GGTTTTTTTG CTTTTTCAAC TGCAGCAGCG AATAAATACC CTTCGCGACC AAATGGATAA GCTGGCAGCC GGCAATCTTC ATCTGGAGAA AAGCCAGGAA AGGATGGAAC AGCTGCTGAG AGAGGAAATG AGCTGCAACC GGGAAGAAAT GAATGTGACG GCTCGGCAGG GCAGGGAAGA GCTGAGCAAT TCATTTAAGA CCTTGAGCGA TTCGCTCTCG GCACGAATGG TAGAAATGGG AAACTTGCAG CAATACCAGC TGGATGGTTT CTCCCAACAG ATGGCCCATT TGACCCAGAG CAATGAGCAG AAGCTGGAAC AGATGAGGGG AACCATAGAA GAAAGGGTGA GGGAATTACA AAAGGAAAAC GCCCAGAAGC TGGAGCAGAT GAGAACGGTG GTAGATGAAA AACTGCATGC TACTCTGGAA CAACGGCTGG GCGAATCCTT CAAACTGGTA AGTGAGCGAC TGGAACAGGT ACATAAGGGC CTGGGTGAAA TGCAAGCTCT GGCAAGCGGT GTTGGTGATC TAAAGAAAGT TCTTAGCAAT GTTAAAAGCA GGGGAACCTG GGGAGAAGTG CAATTGGGCA ATATACTGGA AGATATACTA GCTCCGGAAC AGTATGGCAG CAATGTGGCA GTAAAAAAGG GGGCGGAGAG AGTGGAGTTT GCCGTAAAAC TCCCCGGACC GGATAAAGAG GGCTCTCCCT TATGGCTGCC AATAGATGCC AAATTCCCCC TGGAGGATTA TCATCGCCTC CTGGAGGCTT ATGACGGGGC CGATTTGGCT GCTATAGAAC AGGCGGGCAA AAACCTGGAA AACCGGATTA AGGCCCAGGC CAAAGAGATC TGCAGCAAAT ATATTGAACC CCCTGCCACC ACGGACTTTG CCATAATGTT TCTGCCCACC GAAGGACTTT ATGCGGAAGT ATTACGCCGG CCGGGGCTTT TTGAGAACCT GCGCCAGGAT TACCGGATAA CAGTTGCCGG GCCTACCACC CTGGCAGCGC TGCTGAATAG TTTATCCATG GGATTTCGCA CCCTGGCCAT TCAAAAGAGA TCGGGGGAAG TATGGGCCAT ATTGGGAGCC ATAAAGAGCG AGTTTGGCAA ATTCGGTATG GTATTGGAGA AAACCCGCAA GAAACTGCAG GAAGCCAGCA ACAGTATTGA GGAGGCCGCC AGGAGATCGC GGGTAATGGA ACGAAAACTA AAAGAGGTGG AAGAACTCCC TGAAAAACAG GCGAATGAAT TATTAAGCGC TGAGGGCTAT GGGGAGGAAA TAGCGGCCGG AAGTGATAGC TGA
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Protein sequence | MMEQAAIIAV IIGLALLVFL LFQLQQRINT LRDQMDKLAA GNLHLEKSQE RMEQLLREEM SCNREEMNVT ARQGREELSN SFKTLSDSLS ARMVEMGNLQ QYQLDGFSQQ MAHLTQSNEQ KLEQMRGTIE ERVRELQKEN AQKLEQMRTV VDEKLHATLE QRLGESFKLV SERLEQVHKG LGEMQALASG VGDLKKVLSN VKSRGTWGEV QLGNILEDIL APEQYGSNVA VKKGAERVEF AVKLPGPDKE GSPLWLPIDA KFPLEDYHRL LEAYDGADLA AIEQAGKNLE NRIKAQAKEI CSKYIEPPAT TDFAIMFLPT EGLYAEVLRR PGLFENLRQD YRITVAGPTT LAALLNSLSM GFRTLAIQKR SGEVWAILGA IKSEFGKFGM VLEKTRKKLQ EASNSIEEAA RRSRVMERKL KEVEELPEKQ ANELLSAEGY GEEIAAGSDS
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