Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0011 |
Symbol | |
ID | 4281314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 14740 |
End bp | 16320 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638136905 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_752741 |
Protein GI | 114565587 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.140902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAGAACA TGCATAGTTT GCTAAGACGG CAGTTACGCA AGCAATTCGG GAACAATATT CCGGATATTC CCGGGTGGGA TACATTTCTT AAGCAGGTAA ATGACGCTTA CCAGGAATTC GATGCTGATC GAAATATGTT GGAACGCGCG TTGGAAATAA GTTCCCAGGA ATTGCTGGAA ACCAACTCGC AACTCCGGGC TGTATTAGAA GCTTTTCCCG ATGTTTTTTT GCTGCTGGAC TCCCAGGGTA TTATTATTGA ACTAAAAGCC GGCCGTTCCA CTGACCTGTA TATGTCCCCG GAGCAACTTC TAGGCCATCA CATCGAAGTA ATTCATCCTG ACATCAGTAA TTCGCCCTTT GCCACGGCTG TAGAACAAGT ACTGCAAAGC GGAAAGCTCA TTAGTTTCGA GTATCCCGTG CTGCTAAACC AACAGGAACA TTATTTTGAA GCCAGGTTGC TGCCGGTATC CGGGGACCAT GTCTTCGTTA TCATCCGAAA TGTCACCGAA CGCCGTATCA TGGAAGACCA ATTGCGCTAT CTTAGTATGC ATGATGCTCT GACCGGTTTG TATAACCGCT CCTATTTTAA GCTGGAAACT GCCCATCTGG AAAAGCAATC CCGTCGCCCG ATTGGTCTAA TTGTTGGCGA TGTCGATGGC CTGAAACTGG TTAATGATAC CCTGGGCCAC GAAGCAGGTG ATGACCTGCT TATTAAAGCA GCTCATGTTC TTAAAGACTC CCTGCGTGAT TGTGACTTTG TAGCCCGTAT AGGTGGTGAT GAATTCGCCG CTATTCTTTA CGATTGCAAT ACCCCGGGAA TTGAAGGTGT TATTAAACGT ATTGAAAAAA ATATTGCCTT GGTGAACTCT CGTAATCCGA CCCTCCCCTT AAGTATTTCC CTGGGCTATG CCGTAAGAAA TGATGCCTCT AAGAGCATGG ATGAACTCTT CAAGGAAGCT GATGACAATA TGTACAAGGA AAAGCTTGAC CATCGCAAGA ATTTTAATGC TAACCTGGTC AGCACCCTAA TGAGTTCTAT GGATGAAAAA CATTTTTTCA ATCAAGACCA TGTTGAGCAG ATGCAGGAGT TGGTGTGCAT TATGGCTGAA GCTCTGGATA TGTCTCCAAG TCAAATATCA TGCATGAACC TACTAGCACA GTATCACGAC ATAGGCCAGG TAGGGATATC TGATGCTGTT CTTTTTAAGA AAGGCAAACT TAATTCTCAA GAGCGTTTAC AAATAGAAAG GCATCCAGAA ATAGGCTATC GTATTGCCCG TTTATCTCCT GAATTGATGC CGATAGCTGA TTGGATACTC AGACACCACG AGTGGTGGAA TGGACAGGGT TACCCCTGTG GCCTGGCAGG TGAGGATATC CCCCTGGAGT GCCGCATACT GGCCCTGGTT GACGCCTATA GTGCCATGAC CAGCGATCGT CCCTACCGTA AAGCCATGAG TCATGAAGAG GCTATTGAGG AGATAAAAAG TAAAGCCGGA ACCCAGTTTG ACCCTGAATT AGTCCGCTTA TTTCTGTCAG AAATAGAAAC AAAATTCCCT TCACCCGGGT CAAAATCATG A
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Protein sequence | MENMHSLLRR QLRKQFGNNI PDIPGWDTFL KQVNDAYQEF DADRNMLERA LEISSQELLE TNSQLRAVLE AFPDVFLLLD SQGIIIELKA GRSTDLYMSP EQLLGHHIEV IHPDISNSPF ATAVEQVLQS GKLISFEYPV LLNQQEHYFE ARLLPVSGDH VFVIIRNVTE RRIMEDQLRY LSMHDALTGL YNRSYFKLET AHLEKQSRRP IGLIVGDVDG LKLVNDTLGH EAGDDLLIKA AHVLKDSLRD CDFVARIGGD EFAAILYDCN TPGIEGVIKR IEKNIALVNS RNPTLPLSIS LGYAVRNDAS KSMDELFKEA DDNMYKEKLD HRKNFNANLV STLMSSMDEK HFFNQDHVEQ MQELVCIMAE ALDMSPSQIS CMNLLAQYHD IGQVGISDAV LFKKGKLNSQ ERLQIERHPE IGYRIARLSP ELMPIADWIL RHHEWWNGQG YPCGLAGEDI PLECRILALV DAYSAMTSDR PYRKAMSHEE AIEEIKSKAG TQFDPELVRL FLSEIETKFP SPGSKS
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