Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0007 |
Symbol | |
ID | 4281307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 8470 |
End bp | 9354 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638136898 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_752737 |
Protein GI | 114565583 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.328963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA AGGCAACATT AAAAAGCAAG ACCGATCTGG CCCAAAGGTT AAAAGGCGGC GTAATCATGG ATGTTACTAC TCCAGAGCAG GCCAAAATAG CTGAAGAGGC CGGAGCCTGT GCGGTGATGG CCCTGGAGAG GGTTCCAGCC GACATAAGAG CAGCCGGAGG TATTGCCCGG ATGGCTGACC CCAGTGTTAT CCTGCGGATT AAGGAGAAAG TTACTATTCC GGTAATGGCT AAATGCCGGA TAGGGCATTT TGTAGAAGCC CAGATTCTGG AGGCACTGGG AATTGACTTC ATAGATGAAA GTGAAGTTCT AACCCCGGCT GATGATAAAC ATCATGTAAA CAAGGACGCT TTCCAGGTAC CCTTCGTTTG CGGAGCCCGT AACCTGGGTG AAGCCCTTCG CCGTATTGGC GAAGGAGCGG CTATGATCAG AACCAAAGGA GAAGCGGGTA CCGGGAATGT AATTGAAGCG GTTCGGCATA TCAGACAGGT CAATGAGCAT ATCAGGTGGG TCAGCAGCCT GCCAGCAGAA GAACTAATGG CTGCAGCTAA AGAGCTGGGA GCACCATACG AATTGTTACA GGAAGTAGCA CGGCTAAAAG GCTTGCCGGT AGTAAATTTT GCCGCCGGGG GTATAGCTAC TCCGGCTGAT GCAGCTATGA TGATGCAGCT GGGTTGTGAT GGAATATTTG TGGGTTCCGG TATATTCAAA TCAGGTGACC CTATGAAGAG AGCCCGGGCC ATAGTAACCG CTACTGCCTA TTATCAGGAT CCTGTAGTTT TGGCAGAAGT ATCACGGGAT TTGGGTGAAG CCATGGTGGG AATAGATATC AGTACTATAA GGCCGGAAGA AAGAATGCAG GAACGCGGCT GGTAA
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Protein sequence | MEEKATLKSK TDLAQRLKGG VIMDVTTPEQ AKIAEEAGAC AVMALERVPA DIRAAGGIAR MADPSVILRI KEKVTIPVMA KCRIGHFVEA QILEALGIDF IDESEVLTPA DDKHHVNKDA FQVPFVCGAR NLGEALRRIG EGAAMIRTKG EAGTGNVIEA VRHIRQVNEH IRWVSSLPAE ELMAAAKELG APYELLQEVA RLKGLPVVNF AAGGIATPAD AAMMMQLGCD GIFVGSGIFK SGDPMKRARA IVTATAYYQD PVVLAEVSRD LGEAMVGIDI STIRPEERMQ ERGW
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