Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_R0040 |
Symbol | |
ID | 5197393 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3844814 |
End bp | 3846312 |
Gene Length | 1499 bp |
Protein Length | |
Translation table | |
GC content | 55% |
IMG OID | 640583044 |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.509918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATCAACTTGA GAGTTTGATT CTGGCTCAGA ACGAACGCTG GCGGCATGCC TAACACATGC AAGTCGAACG AAGGCTTCGG CCTTAGTGGC GCACGGGTGC GTAACGCGTG GGAATCTGCC CTTGGGTACG GAATAACTCA CCGAAAGGTG TGCTAATACC GTATGATGAC GTAAGTCCAA AGATTTATCG CCTGAGGATG AGCCCGCGTT GGATTAGCTA GTTGGTGGGG TAAAGGCCTA CCAAGGCGAC GATCCATAGC TGGTCTGAGA GGATGATCAG CCACACTGGG ACTGAGACAC GGCCCAGACT CCTACGGGAG GCAGCAGTGG GGAATATTGG ACAATGGGCG AAAGCCTGAT CCAGCAATGC CGCGTGAGTG ATGAAGGCCT TAGGGTTGTA AAGCTCTTTT ACCCGGGAAG ATAATGACTG TACCGGGAGA ATAAGCCCCG GCTAACTCCG TGCCAGCAGC CGCGGTAATA CGGAGGGGGC TAGCGTTGTT CGGAATTACT GGGCGTAAAG CGCACGTAGG CGGCTTTGTA AGTTAGAGGT GAAAGCCCGG GGCTCAACCC CGGAATAGCC TTTAAGACTG CATCGCTTGA ACGTCGGAGA GGTGAGTGGA ATTCCGAGTG TAGAGGTGAA ATTCGTAGAT ATTCGGAAGA ACACCAGTGG CGAAGGCGGC TCACTGGACG ACTGTTGACG CTGAGGTGCG AAAGCGTGGG GAGCAAACAG GATTAGATAC CCTGGTAGTC CACGCCGTAA ACGATGATAA CTAGCTGTCC GGGCACTTGG TGCTTGGGTG GCGCAGCTAA CGCATTAAGT TATCCGCCTG GGGAGTACGG CCGCAAGGTT AAAACTCAAA GAAATTGACG GGGGCCTGCA CAAGCGGTGG AGCATGTGGT TTAATTCGAA GCAACGCGCA GAACCTTACC AACGTTTGAC ATCCCTAGTA TGGATCGTGG AGACACTTTC CTTCAGTTCG GCTGGCTAGG TGACAGGTGC TGCATGGCTG TCGTCAGCTC GTGTCGTGAG ATGTTGGGTT AAGTCCCGCA ACGAGCGCAA CCCTCGCCTT TAGTTGCCAT CATTTAGTTG GGTACTCTAA AGGAACCGCC GGTGATAAGC CGGAGGAAGG TGGGGATGAC GTCAAGTCCT CATGGCCCTT ACGCGTTGGG CTACACACGT GCTACAATGG CAACTACAGT GGGCAGCAAT CCCGCGAGGG CGAGCTAATC TCCAAAAGTT GTCTCAGTTC GGATTGTTCT CTGCAACTCG AGAGCATGAA GGCGGAATCG CTAGTAATCG CGGATCAGCA TGCCGCGGTG AATACGTTCC CAGGCCTTGT ACACACCGCC CGTCACACCA TGGGAGTTGG ATTCACCCGA AGGCGCTGCG CTAACCGCAA GGAGGCAGGC GACCACGGTG GGTTTAGCGA CTGGGGTGAA GTCGTAACAA GGTAGCCGTA GGGGAACCTG CGGCTGGATC ACCTCCTTTC TAAGGATAG
|
Protein sequence | |
| |