Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5351 |
Symbol | |
ID | 5195772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 257895 |
End bp | 259787 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640579278 |
Product | heat shock protein 90 |
Protein accession | YP_001260226 |
Protein GI | 148550787 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.514382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA TTACCGACGC TTCCCCCGAC ACGCGGTCCT TTGAAGCCGA TGTCGCCAAG CTGCTGCACC TCATGGTGCA CTCCGTTTAT TCGGACAAGG ATGTCTTCCT TCGCGAACTG GTGTCCAATG CCGCCGACGC CTGCGAAAAG CTGCGCTACG AAGCGATAGC GGCGCCGGCA CTGCTGGGTG ACGACCCTCA GCCGCGGATC ACGATCACGC TCGATCCCGA TGCGCGCCAG TTGACCATCG AGGATAATGG CATCGGCATG ACCCAGGCCG AAATGGCCGA GGCGCTCGGC ACGATCGCCC GCTCAGGCAC CAAAGCCTTC ATGGAACAGA TCGCCGCCAA GAAGGATGGC GAGGGCGGCC AGCTCATCGG CCAGTTTGGC GTCGGCTTCT ATTCCGCCTT CATGGTCGCA GACAAGGTCG ACGTGTTGTC GCGCCGCGCT GGCGAGGAGG GGGCTGGCCT GTGGACGTCT GATGGGCTCG GAACCTACGC GATCGGGGAT GCTGATCCGG CCGAGGCCCC GGCGCGCGGA ACGCGCGTCA TTCTTCATCT CAAGGAAGAC GCGGCGGACT ATACCCGGCG CTTCAGCGTG GAGCCCAAGA TCAAGGCTCA GTCGGGCCAT GTCCCAGTGC CGATCGTCCT CAAGGACAAA CCCGATGCGG AGCCGGCGCA GATTGCCGAT GGCGCGGCGC TGTGGACGCG GTCCAAGTCC GAAATCAGCG AGGAAGACTA TACCGACTTC TATAGGACCA ACGCCGGACA GTTCGACACG CCGGCACTGA CGCTGCACTA TCGCGCCGAG GGCGTGCACG AATATAATGT GCTCGCTTTT GTGCCTGAGA TGCGGCCCTT CGACCTGTTC GACCCCGATC GGGCCGGGCG GATGAAGCTC TATGTTCGCC GGGTGTTCAT CACGGGCGAG GCGCAGATCC TGCCCCGCTA CCTGCGCTTT GTGCGCGGAC TGGTCGACTC GCAGGACCTG CCGCTCAACG TCTCGCGCGA GATGATCCAG GAGAGCCCGG TTCTGGCCGC GATCCAGAAG GGGGTTTCGA ACCGCGTGTT GAGCGAACTG GAAAAGCTCG CGAACAGCGA TGGCGACAAG TATCTCAAGA TCTGGGAGAA TTTTGGGTCG GTCCTGAAGG AGGGTCTCTA CGAGGACTAT GCCCGGCGCG AGACGCTGCT GGGGCTCGCC CGCTTCAAGA CCAGCACGTC GAACAATGAA TGGCGGTCGC TCAAGGACTA TGCTGCCGAT CTGAAAGAGA ACCAGACCGC GATCTATTAT GCGGTGGGTT CCGACATCGA GCGGCTCGCC TCCTCGCCGC AGCTCGAAGG CTTCCGCGCG CGCGGCATCG AGGTGCTCCT GCTGACCGAC CAGATCGACG GTTTCTGGGT GACCGGAGCG CCGGATTTCG AAGGCAAGCC GTTCAAGTCG GTGACACAGG GCATGTCGGA TCTGGGTCTC ATCCCCCTCG CCGATGGCGA GCAACCGCCG GCGGAAACGT CGGACGAGGT CGCCGGCTTC ATCGACTTCG TCAAGGCGAC GCTGGGCGAT GTGGTGTCCG ATGTCCGCGC GTCGGAACGG CTGACCGACA GCCCGGTCTG CCTGGTCGCG CCCGAACACG GCATGGACCG CCAGATGGAG CGGCTCCTGG CGGGCGCGGG GCAGCTTGCG CAGGTGAGCA AGCCGGTCCT CGAGATCAAT CCCCGGCACG CGCTCGTTAC CCGGCTCAGC GCGGTAGGCG CAGAGCAGGC GGATCTGCGC GAGGATGCAG CGCATCTGCT GTTCGACGAG GCCCGCATCG CCGACGGGGA ACTGCCGCTC GATCCGCGCG CCTTTTCTGA ACGGCTTGGC CGGGTCCTGC TCCGCGGCAG CGGCCCGATC TGA
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Protein sequence | MSTITDASPD TRSFEADVAK LLHLMVHSVY SDKDVFLREL VSNAADACEK LRYEAIAAPA LLGDDPQPRI TITLDPDARQ LTIEDNGIGM TQAEMAEALG TIARSGTKAF MEQIAAKKDG EGGQLIGQFG VGFYSAFMVA DKVDVLSRRA GEEGAGLWTS DGLGTYAIGD ADPAEAPARG TRVILHLKED AADYTRRFSV EPKIKAQSGH VPVPIVLKDK PDAEPAQIAD GAALWTRSKS EISEEDYTDF YRTNAGQFDT PALTLHYRAE GVHEYNVLAF VPEMRPFDLF DPDRAGRMKL YVRRVFITGE AQILPRYLRF VRGLVDSQDL PLNVSREMIQ ESPVLAAIQK GVSNRVLSEL EKLANSDGDK YLKIWENFGS VLKEGLYEDY ARRETLLGLA RFKTSTSNNE WRSLKDYAAD LKENQTAIYY AVGSDIERLA SSPQLEGFRA RGIEVLLLTD QIDGFWVTGA PDFEGKPFKS VTQGMSDLGL IPLADGEQPP AETSDEVAGF IDFVKATLGD VVSDVRASER LTDSPVCLVA PEHGMDRQME RLLAGAGQLA QVSKPVLEIN PRHALVTRLS AVGAEQADLR EDAAHLLFDE ARIADGELPL DPRAFSERLG RVLLRGSGPI
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