Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5315 |
Symbol | |
ID | 5195838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 211666 |
End bp | 213918 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640579242 |
Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein |
Protein accession | YP_001260190 |
Protein GI | 148550751 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.510748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.200226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCA TCATCGCTCA CGACGGCATC GGCGCTCCGC TCAGCCGGGT CGAGGGACTT CTGAAGGTGA CCGGCAAGGC GCGCTATGCC GCCGAATATC CCGCCACTGG CCTGCTCCAT GGGGTCGTCG TCAATGCCGC GATCGCGCGC GGGCGGATCA CCCGGATCGA CGACAGTGCC GCACGCGCGG TCGCAGGCGT CGTCGATGTG CTCACCCATG AAAATCGGCT TGAGATCGCA TCCGCGGACA AGAAATTTCA GGATGACGTC GCCCCGCCCG GCTCGCCCTT GCGCCCCCTG TGCGACGCGC AGATCCACTA TAATGGCCAG CCGGTCGCCC TCGTCGTCGC CGAGACATTC GAGGCGGCGC GCTATGCGGC AAGTCTCGTC GAGCTCGGCT ACGAGCAGGA TGCGCACAAT ACCCGGTTCG AAGTCGCGCT TGCGGAAAAG TTCGTGCCCA GGAAGAAGCG GTCAGGATAT TATCCGCCCA AGAACCGCGG CGACGCGCGC TCGGCCTTCG AGGCCGCACC GGTCACGATC GCCGGCGATT ATCACAAGGG CGCCGAGCAC CATAATCCCA TGGAGATGCA TGCCTCGACC GTCTTCTTCG AAGGAGACGG CAGGCTCACG GTTCATGACA AGACACAGGG TCCTCAGAAT GTGCAGGCCT ATCTGGCCGG CGCGTTCGAC CTGAAGGCCG ACGATGTCCG CGTGCTCAAT CCCTTTGTCG GCGGCGCGTT TGGTTCGGGG CTGCGACCAC AATATAATGT TTATCTGGCA GCCATGGCCG CCTTGAAGCT GAAACGCTCG GTACGCGTCG TGCTCACCCG CCAGCAGATG TTCACCCATA CGCACCGCCC CGAATGCCTC AACTCGATCT CGCTTGGTGC CGAGCGCGAC GGGACTCTGA CAGCGATCCT GACCGACGCC ACGACCCTGA CGTCCAGGTT CGAGAATTAC ATGGAGACCG TCGTCAACTG GGGCATGATG AACTATGCCT GCGAGAACGC GGAAGGCGCC TCCTATATCG CGCCGGTCGA CACCTATACG CCTGGCGACA TGCGCGCGCC CGGCGCGGCG ACCGGCATGA CGCAATTCGA GATGGCGATG GACGAGCTGT CCTACGCGGT CGGCATCGAT CCTCTCGACT TGCGGGTGAA GAATTACTCC AACATCGACG CGATGAACGG GACCGAGTTC ACCAGCAAGG CTCTGCGCGA AGCCTATGCG CAGGGCGCCC AGGCTTTTGG ATGGGACAGG CGCAGCCCGC AGCCGCGTTC GATGCGCGAA GGCAAGGAAC TGATCGGCTG GGGCATGGCG ACCGGAATGT GGGACGCGAT GTTCTCCAAA TGCGCGGCCC GTGCGACGCT CAAGACCGAC GGCACGCTCG AAGTCGCAAG CGCGATGTCG GACATCGGCA CGGGCACCTA CACGGTGATG ACCCAGGTCG CGGCGGATAC GCTCGGACTA CCGGCCTCGG CTATCACGGC AAAGCTCGGC GATTCCACAC TTCCGCTATC GCCGGTAGAG GGCGGCTCCT GGGGTGCGGC GTCTGTGGGC GCAGCGGTGC AGCTTGCCTG TCATGGCGTG GCCGCCCGGC TCGCCAAGGC TGCTGCGAAG ATGGACGGCG ATCCGCTCGA GGGCGCGAAG CTGGATGACC TGCTCTTCGA GAATGGAACC ATGCGCCGCC GTGACGGCAA AGGTGAAGCG GTCCCCTTCA CGGCGGCGAT GGAGGCCGCG GCGCTGGACA GGATCGAGGT CGAGAAGACA GCGCAGCCTG GCCCCCTCGA CATGGTCAGC CTGATGCGCA AGTCGCGCAA CACCCATAGC GCGGTGTTCT GCGAGGTGCG GGTGGACGAG GAGCTGGGCG TCGTCCGTGT GACGCGAGTG GTGAGCGCGA TCGCGGCCGG CAGGATCATC AACCCCAAGA CCGCGCGCAG CCAGATACTC GGCGGGGTCG TGATGGGGAT CGGCGCGGCG CTGCACGAGG AAAGCTTCCT CGATCACCGG CTCGGCCGGT TCATGAACAA CAATTACGCG GAATATCATG TGCCTGCCCA TGCCGACATC CACGATATCG AGGTGATCTT CGTCCACGAA CCCGACCCCG AAGTCACCCC GCTCGGCGTG AAGGGCCTGG GCGAGATCGG TATAGTCGGC ACTGCGGCCG CAGTCGCAAA TGCCATTTAT CACGCGACCG GGGTGCGGGT ACGCAGCCTG CCGGTCACGA TCGACAAGCT GCTCGTGGAC TGA
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Protein sequence | MAAIIAHDGI GAPLSRVEGL LKVTGKARYA AEYPATGLLH GVVVNAAIAR GRITRIDDSA ARAVAGVVDV LTHENRLEIA SADKKFQDDV APPGSPLRPL CDAQIHYNGQ PVALVVAETF EAARYAASLV ELGYEQDAHN TRFEVALAEK FVPRKKRSGY YPPKNRGDAR SAFEAAPVTI AGDYHKGAEH HNPMEMHAST VFFEGDGRLT VHDKTQGPQN VQAYLAGAFD LKADDVRVLN PFVGGAFGSG LRPQYNVYLA AMAALKLKRS VRVVLTRQQM FTHTHRPECL NSISLGAERD GTLTAILTDA TTLTSRFENY METVVNWGMM NYACENAEGA SYIAPVDTYT PGDMRAPGAA TGMTQFEMAM DELSYAVGID PLDLRVKNYS NIDAMNGTEF TSKALREAYA QGAQAFGWDR RSPQPRSMRE GKELIGWGMA TGMWDAMFSK CAARATLKTD GTLEVASAMS DIGTGTYTVM TQVAADTLGL PASAITAKLG DSTLPLSPVE GGSWGAASVG AAVQLACHGV AARLAKAAAK MDGDPLEGAK LDDLLFENGT MRRRDGKGEA VPFTAAMEAA ALDRIEVEKT AQPGPLDMVS LMRKSRNTHS AVFCEVRVDE ELGVVRVTRV VSAIAAGRII NPKTARSQIL GGVVMGIGAA LHEESFLDHR LGRFMNNNYA EYHVPAHADI HDIEVIFVHE PDPEVTPLGV KGLGEIGIVG TAAAVANAIY HATGVRVRSL PVTIDKLLVD
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