| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5294 |
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| Symbol | |
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| ID | 5195651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 194232 |
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| End bp | 195734 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579221 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001260169 |
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| Protein GI | 148550730 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.814589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCGCG GCAATGGTGC AAGCCGGCTC CTGCCCCGGC TCGCCCTGCC CGCTGCCCTC
GGCGTCGCGC TGCTCGCGAT CGCCGGTGGC CTCGCCGTAC GGCTCCTGTT TGCCGATCAG
CTCGGCGCGC GCGCGACCTT CATCTTCTTC GTCCCGGGCG TGGTCGCCGC AAGCGCCCTG
TCAGGCCTTC GCGTCGGCGC GATGGCTTCG CTGGCCGGCG CAGCCGCCGG CCTGTGGTGC
GACCACCTGA CAGGCCCGAT CGAGGAAGGC AGCGTAATTG CTGCGGTGGC TTTCGTAGCG
ATCGGGCTCG CCATCGCGCT AGGGGGCGAG TGGTTTCAGC GAGCCCGTCT TGCTTCGGAC
GAGGCCGCCG CCGGCCTCGC CAGCCGAGAG GCGCATCTGC GCTCGATCCT CGACACCGTC
CCCGACGCCA TGGTGGTGAT CGACGCTGCG GGGCTCATTC GCGACTTCAG CCCAGCGGCG
GAACGGATGT TCGGCTGGAA GGCGCAGGAG ATAGCGGGCC GCAACGTGCG GCTGCTGATG
CCCGAGCCCT ACCGCGCAGC CCATGATGGC TATCTGGATC GCTATTACCA GACGGGAGAG
CGCCGCATCA TCGGCAAGGG CCGCGTCGTC GTAGGCGAAC GCCGCGACGG ATCGACCTTT
CCGCTCGAAC TCGCCGTCGG CGAAGTCCAG GTCAACGGAC AGCGCTTTTT CACCGGCTTC
ATCCGCGATC TCACCGAGCG CCAACATGCC GAGGCGAGGC TGCAGGAACT GCAGAGCGAA
CTCGTTCACG TCTCGCGGCT GACCGCCCTG GGTGAAATGG CCTCGGCCCT CGCCCATGAA
CTGAACCAGC CCCTCTCCGC CATCGCCAAC TATCTCAAGG GCAGCAAGAT GCTGCTCGAA
CGCGAGGAAG ATCGCAACGA CCGGGTTATC GATGCGGTCG GCCGCGCTGC CGCCGAGGCG
CTGCGCGCCG GGAAAATCAT CCGCCGGCTG CGCGATTTCG TCGCGCGCGG CGAAACCGAA
CGAGCGGTCG AAAGCCTGCC GAAGCTTGTC GAGGAGGCGA GCGCGCTGGC GCTCGTTGGC
GCCAAGGAGC ATGGGATACG CGTCCAGCAT GACTTCAGCC CTGAGATCGA CCTCGTGCTC
GCGGACAAGG TGCAAATCCA GCAGGTGGTG CTCAACCTCG TTCGCAATGC CATCGACGCC
ATGGCCGGGA ATGGATCGGG GCCACGTGCG CTGACCATCG CCATCGCGCC GGCCGACACC
GACATGGCGC GGGTGACGGT CGCCGATACC GGCCCGGGCA TCGCGGCCGA TGTGGCAGAC
CGGCTGTTTC AACCATTCAT CACCACGAAA CGCACCGGCA TGGGTGTAGG CCTCTCGATC
TCGCGCACGA TCGTCGAGGC CCATGGCGGG CGCATTTGGG CCGAATCTCA TGAAGGGGGC
GGGGCCGTGT TCGGCTTCAC GCTGCCCAAG GCGGACAAGG AAGGGCCAGG CGATGGCGAG
TGA
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| Protein sequence | MARGNGASRL LPRLALPAAL GVALLAIAGG LAVRLLFADQ LGARATFIFF VPGVVAASAL
SGLRVGAMAS LAGAAAGLWC DHLTGPIEEG SVIAAVAFVA IGLAIALGGE WFQRARLASD
EAAAGLASRE AHLRSILDTV PDAMVVIDAA GLIRDFSPAA ERMFGWKAQE IAGRNVRLLM
PEPYRAAHDG YLDRYYQTGE RRIIGKGRVV VGERRDGSTF PLELAVGEVQ VNGQRFFTGF
IRDLTERQHA EARLQELQSE LVHVSRLTAL GEMASALAHE LNQPLSAIAN YLKGSKMLLE
REEDRNDRVI DAVGRAAAEA LRAGKIIRRL RDFVARGETE RAVESLPKLV EEASALALVG
AKEHGIRVQH DFSPEIDLVL ADKVQIQQVV LNLVRNAIDA MAGNGSGPRA LTIAIAPADT
DMARVTVADT GPGIAADVAD RLFQPFITTK RTGMGVGLSI SRTIVEAHGG RIWAESHEGG
GAVFGFTLPK ADKEGPGDGE
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