Gene Swit_5249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5249 
Symbol 
ID5195591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp138369 
End bp138941 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content70% 
IMG OID640579177 
Productankyrin 
Protein accessionYP_001260125 
Protein GI148550686 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATG AGGCCGGCGA TCTGCCGCCC CTGCCCTCGC CCGAGCGGCT GCGCGAACTG 
ATGTTCGATG CGGCGAGGTT GGGGCGGACG GACGTGCTAC CGGCCCTGCT GCATGCGGGC
TGCGCGGTCG AGGCAAAGGA TAAGCGGGGC TATACCCCGC TCATCCTGGC GGCCTATCAT
GGGCAGGACG AGGCCGTCGC GCTGCTGCTC GATCACGGCG CCGATCCCGA GGCGGGCGAT
GCCGCGCGCG GCAATACCGC GCTGATGGGC GCTGCGTTCA AGGGCTTCAC ATCGGTCGCG
AGGCTGCTTC TCGAGCGCGG AGCAGACGCC GAGGCGACCA ACAAGGCCGG CCAGACCGCC
CTCATGCTGG CCGCACTGTT CGACCGGCGA GAGATCGCCG ATCTCCTGCT CGCACGGGGC
GCGGACCCCG AGCGGTGCGA CGCCGCGGGC AACTCGGCAC TGTCGGTGGC GCGCGACCAG
AACAACGCCG CCATGGCCGA ACATTTGCGC GGCGCCTGTC CTGCATCTCG GCCTGGGAGC
CGGCGGGCAG AAAGCGCCAT TCCTGCATCG TAG
 
Protein sequence
MPNEAGDLPP LPSPERLREL MFDAARLGRT DVLPALLHAG CAVEAKDKRG YTPLILAAYH 
GQDEAVALLL DHGADPEAGD AARGNTALMG AAFKGFTSVA RLLLERGADA EATNKAGQTA
LMLAALFDRR EIADLLLARG ADPERCDAAG NSALSVARDQ NNAAMAEHLR GACPASRPGS
RRAESAIPAS