| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5221 |
|---|
| Symbol | |
|---|
| ID | 5195769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | - |
|---|
| Start bp | 112193 |
|---|
| End bp | 112594 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640579149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260097 |
|---|
| Protein GI | 148550658 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3152] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.170062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTG GCGAAATCCT GCTGTCTCCG AAAGGTCGAG TGGGCCGCGC CCCGTTCCTG
GCGGTTGTGG CCACAGGTTG GGCGATCGCG TTCGATCTCC TGCCTTTCAA CCCGCTGCTC
GCGCTACGCT ATGCCGCCAC CATCAATGTC GCGGTCGTCG TCATTAGCGC GCTGGCGGTC
TGGGTGGGGA TCGCCATTAC GGTCAAGCGT TTCCACGACG TTGGATTATC GGGGTTCAAT
ACGGTCGGAT TGGTCTGGGC GACGCTGCGC GGCGACCCGC TGGCGATCGA CGCGCCTTTG
GCCATGGCCA TCGCGGCCTT TGGGATCATC ACCCAGCTAT GGCTTTGCAT AGAGCCGGGC
TCGCGGAGCG CCAATCGCTT CGGCAATCCC GTGTCGGCTT AA
|
|---|
| Protein sequence | MDIGEILLSP KGRVGRAPFL AVVATGWAIA FDLLPFNPLL ALRYAATINV AVVVISALAV
WVGIAITVKR FHDVGLSGFN TVGLVWATLR GDPLAIDAPL AMAIAAFGII TQLWLCIEPG
SRSANRFGNP VSA
|
|---|
| |