Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5207 |
Symbol | |
ID | 5195729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 97073 |
End bp | 97624 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640579136 |
Product | MucR family transcriptional regulator |
Protein accession | YP_001260084 |
Protein GI | 148550645 |
COG category | [K] Transcription |
COG ID | [COG4957] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.240071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCCGG TAGCGAATAG TCTTCCGGGT TCTTCAACCA GAGAAGGCAA GATCATCATG AGCGACGTAT CGGAAAACGA TAGCACGCTG ATTACCCTGA CCGCTGATAT CGTCGCGGCG CATGTGACGA ACAACAGCGT GGCGGTGGCG GATTTGCCGT CCCTGATCCA GAATGTTCAC GGAGCGTTGA GCAATCTCGG CAAAAGTGAA ACGGCGCCCG AGACAAAGCA GGAGCCGGCG GTATCCGTGC GTGCCTCGGT GAAACCTGAC TACATCGTCT GCCTGGAAGA CGGCAAAAAG CTCAAGATGC TCAAGCGTCA TCTCATGACG CACTATCAGA TGACGCCGGC GGACTATCGT TCGAAGTGGA ATCTTCCGGC CGACTATCCG ATGGTCGCGC CCAATTACGC CGAGCAGCGT CGCACGCTCG CCAAGAGCAT CGGACTTGGC CGCAAGCCCA AGGGGTCCAG CGCTGCCGCA TCGGCAAAGG CGACGAAATC TGCGCCGGTT CGTCGCGGAA GTCCGAAATC CACCGAAGGG CAGCCCGCCT AA
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Protein sequence | MFPVANSLPG SSTREGKIIM SDVSENDSTL ITLTADIVAA HVTNNSVAVA DLPSLIQNVH GALSNLGKSE TAPETKQEPA VSVRASVKPD YIVCLEDGKK LKMLKRHLMT HYQMTPADYR SKWNLPADYP MVAPNYAEQR RTLAKSIGLG RKPKGSSAAA SAKATKSAPV RRGSPKSTEG QPA
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