Gene Swit_5207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5207 
Symbol 
ID5195729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp97073 
End bp97624 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID640579136 
ProductMucR family transcriptional regulator 
Protein accessionYP_001260084 
Protein GI148550645 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.240071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCGG TAGCGAATAG TCTTCCGGGT TCTTCAACCA GAGAAGGCAA GATCATCATG 
AGCGACGTAT CGGAAAACGA TAGCACGCTG ATTACCCTGA CCGCTGATAT CGTCGCGGCG
CATGTGACGA ACAACAGCGT GGCGGTGGCG GATTTGCCGT CCCTGATCCA GAATGTTCAC
GGAGCGTTGA GCAATCTCGG CAAAAGTGAA ACGGCGCCCG AGACAAAGCA GGAGCCGGCG
GTATCCGTGC GTGCCTCGGT GAAACCTGAC TACATCGTCT GCCTGGAAGA CGGCAAAAAG
CTCAAGATGC TCAAGCGTCA TCTCATGACG CACTATCAGA TGACGCCGGC GGACTATCGT
TCGAAGTGGA ATCTTCCGGC CGACTATCCG ATGGTCGCGC CCAATTACGC CGAGCAGCGT
CGCACGCTCG CCAAGAGCAT CGGACTTGGC CGCAAGCCCA AGGGGTCCAG CGCTGCCGCA
TCGGCAAAGG CGACGAAATC TGCGCCGGTT CGTCGCGGAA GTCCGAAATC CACCGAAGGG
CAGCCCGCCT AA
 
Protein sequence
MFPVANSLPG SSTREGKIIM SDVSENDSTL ITLTADIVAA HVTNNSVAVA DLPSLIQNVH 
GALSNLGKSE TAPETKQEPA VSVRASVKPD YIVCLEDGKK LKMLKRHLMT HYQMTPADYR
SKWNLPADYP MVAPNYAEQR RTLAKSIGLG RKPKGSSAAA SAKATKSAPV RRGSPKSTEG
QPA