| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5153 |
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| Symbol | |
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| ID | 5195813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 46055 |
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| End bp | 47425 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579083 |
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| Product | pyruvate dehydrogenase subunit beta |
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| Protein accession | YP_001260031 |
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| Protein GI | 148550592 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.467221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATTG AACTGAAGAT GCCGGCGCTT TCTCCCACCA TGGAGGAGGG TACGCTCGCA
AAGTGGCTCG TCAAGGAAGG CGATGCGGTG AAATCCGGCG ACATCCTCGC GGAGATCGAG
ACCGACAAGG CGACGATGGA ATTCGAGGCA GTGGACGAGG GCATCATCGC CAAGATCGTC
ATTCCTGAAG GCACCGACGG CGTGAAAGTG GGCGCGGTGA TCGCGCTGAT CGCTGGCGAG
GGTGAAAGCG CCGTGACGGT CCAAGCCGCC GCCCCCGCTC CCAAGGTCGA GGCACCCGCG
CCCAAGGCGG CGGAGCCGGC CCCGCAGCCG GTTGCGGCGC CTGCGCCCCG CGCGGCGGTT
GCCGATCCCG ATATTCCCGC CGGCACCGAG ATCGTGAAGA CCACGGTGCG CGAGGCGTTG
CGCGACGCCA TGGCCGAGGA GATGCGCGCC GACGACCGCG TCTTCGTGAT GGGCGAGGAA
GTGGCGCAAT ATCAGGGCGC CTACAAGGTG ACGCAGGGCC TGCTGGAAGA GTTCGGCGAT
CGCCGCGTCA TCGACACCCC GATCACCGAG TATGGTTTTG CCGGCATAGG CACAGGCGCG
GCGATGGGCG GCTTGAAGCC GATCGTCGAG TTTATGACCT TCAACTTCGC CATGCAGGCG
ATCGACCACA TCATCAACTC GGCGGCCAAG ACCAACTATA TGTCCGGCGG CCAGATGCGC
TGCCCGGTGG TGTTCCGCGG CCCCAACGGC GCCGCCAGCC GCGTCGGCGC CCAGCACAGC
CAGAATTACG GGCCCTGGTA TGCTGCCGTT CCTGGCCTGA TCGTGATCGC GCCTTACTCG
GCCGCCGACG CCAAGGGGCT GCTGAAGGCC GCGATCCGCT CGCCCGATCC GGTCGTGTTC
CTGGAAAACG AGTTGCTCTA CGGCCAGAGC TTCGACGTGC CGAAGCTGGA CGATCATGTC
CTGCCGATTG GCAAGGCCCG CATCGCCCGC GCGGGGCGTG ACGTGACCCT GGTGAGCTAC
TCCATTGGTG TCGGTGTCGC GCTGGAAGCC GCCGACAAGC TGGCAGATGA AGGTGTTGAC
GCGGAGGTGA TCGACCTGCG CACGCTCCGC CCGCTCGATA AGGAAACCGT GCTGAAGTCG
CTCGCCAAGA CCAACAGGAT GGTGGTGGTG GAGGAAGGCT GGCCGGTCTG CTCCATCTCC
TCGGAGATCA TCGCCATCGC CATGCAGGAA GGCTTCGACG ACCTCGACGC CCCGGTGCTC
CGCGTCACCA ACAAGGACGT GCCGCTGCCG TATGCCGCGA ATCTGGAAAA GGCCGCGCTC
ATCAAGGCGG ATGACGTGGT CGCGGCGGTC AAGCGCGTCC GTTATCGCTG A
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| Protein sequence | MAIELKMPAL SPTMEEGTLA KWLVKEGDAV KSGDILAEIE TDKATMEFEA VDEGIIAKIV
IPEGTDGVKV GAVIALIAGE GESAVTVQAA APAPKVEAPA PKAAEPAPQP VAAPAPRAAV
ADPDIPAGTE IVKTTVREAL RDAMAEEMRA DDRVFVMGEE VAQYQGAYKV TQGLLEEFGD
RRVIDTPITE YGFAGIGTGA AMGGLKPIVE FMTFNFAMQA IDHIINSAAK TNYMSGGQMR
CPVVFRGPNG AASRVGAQHS QNYGPWYAAV PGLIVIAPYS AADAKGLLKA AIRSPDPVVF
LENELLYGQS FDVPKLDDHV LPIGKARIAR AGRDVTLVSY SIGVGVALEA ADKLADEGVD
AEVIDLRTLR PLDKETVLKS LAKTNRMVVV EEGWPVCSIS SEIIAIAMQE GFDDLDAPVL
RVTNKDVPLP YAANLEKAAL IKADDVVAAV KRVRYR
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