| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5143 |
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| Symbol | |
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| ID | 5195831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 36884 |
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| End bp | 37858 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579073 |
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| Product | patatin |
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| Protein accession | YP_001260021 |
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| Protein GI | 148550582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3621] Patatin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.527098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA GCGACGTCGG GATCAGGGAA GGTGCGCGCG CGCAGCCGGC CAAACGGTTC
CGCATTCTGG CGCTGACCGG AGGTGGGTAT CGTGGCCTCT TTACCGTTCG GATCCTCGAA
CAGATCGAGC GGACGATCGG AAAGCCGATC AAAGACCATT TCGATATCAT CGCCGGCACT
TCGATCGGCG GCATCGTGGC CATCGGCCTG GCCCAAGGCA TTCGCCCAGC CGTGATCGGC
GCCGCGTTTG AGAAGCACGG CCAGGCGATC TTCCCGAAGC GGGGTTTACT CGGTCGCTGG
GGGCTGGCGC GCTCGCGCTA TGACGCGGCT GGCCTCGCGC AGACGATCGA CGCCGTTCTT
GGCGAAGCGG GAAAGACGCC CCTGTCCGGC CTGAAGACAC CCCTGATCGT GACCGCGGTC
GATTTCGGCG CCTGGGCGCC GGCAATATAC GAAACCACTG GCATGTCACC GAAGCTCGAA
GGAACCTCGC TACGGGACAT TGCCCTCGCC ACCTCCGCGG CGCCAACCTA TTTCCCCGAC
CATGTGATCG ACGGGCATTC CTATGTCGAC GGCGGACTGA TCGCGAACGC TCCGGATAGT
ATCGCCCTGA TGCGGGCGCT TGGGCGCTAT GGGCGCACGC CCCAGGAAAT CGACCTCATC
AGCGTCGGGA CCGCAGGAGA GCTGCGATGG GATGTGCCGC GTGCGCCCAG GCGCCGCGGC
GGTGTGATGC TGATCGCAAA AGACGAGCTC GTGTCGAGGA CGATGAAGGC GCAGGAGAGC
CTGTCGCTCG ACCTCGTGCA GTCCGTCCTG GGCTCGAGCT ACGTCCGCAT CGATAGGGTG
CCTTCGCTCC AGCAGCAGAA GGAACTTGCG CTCGATCGGG CAACCGACAA AGCGGCCGAG
ATCCTGGGAC AGCTCGCGCG CGACGCCTAT GCGGGAGCCT CGGCGAGCAG CACGTTCAAA
GCGATGCTTC GATAG
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| Protein sequence | MTESDVGIRE GARAQPAKRF RILALTGGGY RGLFTVRILE QIERTIGKPI KDHFDIIAGT
SIGGIVAIGL AQGIRPAVIG AAFEKHGQAI FPKRGLLGRW GLARSRYDAA GLAQTIDAVL
GEAGKTPLSG LKTPLIVTAV DFGAWAPAIY ETTGMSPKLE GTSLRDIALA TSAAPTYFPD
HVIDGHSYVD GGLIANAPDS IALMRALGRY GRTPQEIDLI SVGTAGELRW DVPRAPRRRG
GVMLIAKDEL VSRTMKAQES LSLDLVQSVL GSSYVRIDRV PSLQQQKELA LDRATDKAAE
ILGQLARDAY AGASASSTFK AMLR
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