Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5134 |
Symbol | |
ID | 5195775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 24439 |
End bp | 25995 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640579064 |
Product | AMP-binding domain protein |
Protein accession | YP_001260012 |
Protein GI | 148550573 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0657606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.735688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGCCC GGCGCTGGGG GAGTGAACTG GCATTGGTTT CCCGGCATCA GAATATATGC TGGAGCTGGC AGGAACTGAA CCGCGAAGCG GAACGGGTCG CGTGCGGACT GCTCGATCAT GGGGTGCGTC GCGGCGATCG GGTCGGCATC TGGGCGCCCA ATTGCGCCGA ATGGACCGTG ATTCAATTCG CGACCGCCAA GATCGGCGCG ATCCTGGTAA ACATCAATCC TGCCTATCGT GTCAGCGAAA TCGAGTATGC GCTCGCAAAG GTCGGCTGCA GCGTGCTGGT GACGGCATCT GCCTTCAAAA GCAGTAACTA CATCGCCATG CTACGCGAGA TCGGGACGCG TAGTTTACCT GACCTTCGCC TGGTGATTTC GCTTGGTGAG CAGGCACATG ACGGTTTCAT TCCTTGGGAG CAACTGCGCG TGTCGGCGGA TCCCCTGCTG CTGGGCGCGG CATCGGAAAG TCTGCGACCG GACGATGCCA TCAACATACA ATTCACCAGC GGCACGACGG GTTTTCCAAA GGGGGCAACG CTTACGCATC GCAACATTCT CAACAATGGT TATTTTTCGG GACAAACCAT CAATCTCACC GTCAAGGACC GCATCTGCAT TCCGGTTCCG CTCTATCATT GCTTCGGCAT GGTCCTGGGT AATCTTGCAT CCGTGACGAG CGGGGCTGCG ATGATCTACC CCGGAGAGGC TTATGATGCG CGGATGACAC TTGAGGCGGT GCGAGATGAA CGTTGTACGG CGCTTTACGG AGTGCCGACC ATGCTGATCA CGATCCTCAA CCATCCGGAC CTCGATCAGT TCGACGTCTC GTCCTTGCGC ACCGGGATCA TGGCGGGCGC CCCTTGCCCG GCGGCCATGA TGGAGCAGAT CATGGATCGG TTGAACATGC GCGAGGTGAC TATCGGCTAT GGCATGACCG AAACCAGTCC CCTGACGACG CAGACGTCGA TAGACGATCC CGTCGCAGAG CGAGTGGCGA CGGTGGGCCG CGTCCACCCT CATGCCGAAG CAAAGATCGT AGGGTTGAAC GGCGAGACAT TGCAGGTGAA CCAACAGGGC GAATATTGCT CGCGCGGATA TGCGGTGATG CAGGGATATT GGAACGATCC GGAAAAGACC GACGATGCCA TCGACGCGGA AGGATGGATG CACTCGGGCG ATCTCGCGGT GATGGATGAG CGGGGCTATG TTCGCATTAC CGGCCGCATC AAGGACATGA TCATCCGGGG CGGCGAGAAT ATCTATCCGC GCGAGCTCGA GGAATTCCTG CTTGGCCACC CGTTGATCGT CGATGTGCAG GTCTTTGGCG TCAGCGACGC TAAATTTGGT GAGGAAGTCT GCGCATGGGT CATAGCGCGA GCCGGCCATC GGCTGAGCGC CGACGATGTG ATTGCCCACT GCCGGGGTAA GATCGCCCAC TACAAGGTTC CCCGCTATGT CCGCATCGTC GAGGGCTTCG CTATGACGGT CACGGGCAAG GCGCAGAAGT TCGAGATGCG CAAGACGATG GAAGCTGAAC TGGGCTTGGT GGCTTGA
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Protein sequence | MAARRWGSEL ALVSRHQNIC WSWQELNREA ERVACGLLDH GVRRGDRVGI WAPNCAEWTV IQFATAKIGA ILVNINPAYR VSEIEYALAK VGCSVLVTAS AFKSSNYIAM LREIGTRSLP DLRLVISLGE QAHDGFIPWE QLRVSADPLL LGAASESLRP DDAINIQFTS GTTGFPKGAT LTHRNILNNG YFSGQTINLT VKDRICIPVP LYHCFGMVLG NLASVTSGAA MIYPGEAYDA RMTLEAVRDE RCTALYGVPT MLITILNHPD LDQFDVSSLR TGIMAGAPCP AAMMEQIMDR LNMREVTIGY GMTETSPLTT QTSIDDPVAE RVATVGRVHP HAEAKIVGLN GETLQVNQQG EYCSRGYAVM QGYWNDPEKT DDAIDAEGWM HSGDLAVMDE RGYVRITGRI KDMIIRGGEN IYPRELEEFL LGHPLIVDVQ VFGVSDAKFG EEVCAWVIAR AGHRLSADDV IAHCRGKIAH YKVPRYVRIV EGFAMTVTGK AQKFEMRKTM EAELGLVA
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