| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5097 |
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| Symbol | |
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| ID | 5196000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 208347 |
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| End bp | 209207 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579525 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001260473 |
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| Protein GI | 148551043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 67 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.545434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGAGG TGCTGGATGT GTCCGAGCGA CGGGTGTGCC GCGTCCTCGG GCAGCATCGG
TCGACGCAGC GCAAAGTGCC GTGTGGGGCA GATGACGAGG AGGCGCTGAC CGACGACATC
GTCGCGCTGG CCAGGCAGTA CGGGCGCTAC GGCTATCGCC GGGTAACCGC ACTGCTGCAT
GCGGCCGGCT GGTCGGTGAA CCACAAACGG GTGGAACGGA TCTGGCGACG CGAGGGGCTG
AAGGTGCCTC AGCGACAGCC GAAACGTGGT CGGCTGTGGT TGAACGATGG CTCGTGTATT
CGGCTGCGGC CGGAATATCC CGGGCACATC TGGGCGTACG ACTTTGTCGA GGCACGGACG
CACGACGGGC GCAAGTTCCG CATCCTCACG ATCATCGACG AGGCCAGCCG CGAGTGCCTG
GCGCTGGTGG TCGCCCGTCA GCTTCGCCAC GAAGATGTGC TGGCGGCCCT GGCCGAGCTG
TTCATTGACC GGGGCCCGCC TGACCATATC AGATCGGACA ACGGCAGCGA GTTCATCGCC
ACCGCAGTCC AGAAATGGCT TGGGCAGATC GGCGTGAACA CGCTCTACAT CACGCCAGGC
TCGCCATGGG AGAACGGCTA CAACGAGAGC TTCAATGGCT CGCTGCGTGA CGAGCTGCTT
AACGGAGAGA TCTTCTACAG CCTCGCCGAG GCCAGAGTGC TGATCGAGGC GTGGCGGCGC
CACTACAACA CCATCCGGCC ACATAGCAGC CTGGGCTATC GCCCACCCGC ACCAGAAGCG
GCGACGCCGC CATTGCCGGC CTCCGGTTCC GCTTCGCTCC ACCTGCGCCC GGCAATGGCG
GCGGAGACGA CAATGCACTA A
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| Protein sequence | MREVLDVSER RVCRVLGQHR STQRKVPCGA DDEEALTDDI VALARQYGRY GYRRVTALLH
AAGWSVNHKR VERIWRREGL KVPQRQPKRG RLWLNDGSCI RLRPEYPGHI WAYDFVEART
HDGRKFRILT IIDEASRECL ALVVARQLRH EDVLAALAEL FIDRGPPDHI RSDNGSEFIA
TAVQKWLGQI GVNTLYITPG SPWENGYNES FNGSLRDELL NGEIFYSLAE ARVLIEAWRR
HYNTIRPHSS LGYRPPAPEA ATPPLPASGS ASLHLRPAMA AETTMH
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