| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5092 |
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| Symbol | |
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| ID | 5196056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 202514 |
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| End bp | 205465 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579520 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_001260468 |
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| Protein GI | 148551038 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAC GTATTCCGAT GACCGAGCGG CAGCGCGCCG CGTTGCTTGC TTTGCCCGAC
AGCGAGGCGG CGGTGGTGCG ACACCATGGC CTCGATGCCG AGGACCTTGC TGCGATCGGC
ACCGCACGCA CTCCGGCGAC CCGGTTGAGC TACGCCCTGC AACTCTGCTG CCTGCGCTAT
CCGGGGCGGC ATTTGCGCGC AGGCGAGCTG TTGCCTGCGA TCATGCTCGA GCATATCGCC
GAGCAGGTCG GGGTGGATGC AGGCGCCATC GCCGACTTCG CGCGGCGAGC GCCGACCCGC
TACGATCAGC TTGCCGCCAT CAAGGCGCGC TTCGGCTTCA CCGATCTCAG CCGGCCAGCG
CGCGGCATCA TGATGACCTG GCTAGAAACC GAAGCCATGG CCATCGTGGA CGGGCGTATT
CTGCTCGATC GACTGCTCGA CGAGCTGCGC ACGCGGCGCA TCGTCATCCC CGGCATCAGC
GTAGTCGAGC GGATGGCGGC CGAGGCGATG CTGCGGGCGG AAACCGATCT GGTCGCCGCA
GTCGACGATA AACTCGATGC GGATATGCGT CAGCGTCTCG ATACGCTGGT CGACGAGAAG
GTGCATCACC GACAGAGCCG CTTGTCGTGG TTGCGCGAAC CGGAGCCCCG CGTAGCGTCA
GCCTCGCTCG CTGAAATCCT CGAAAAGGTC GCGCTGATTC ACAGGACCGG TATTGCCTGT
GTTCCGGTCG ATCCCCTGCA CGAGCCACGC CTGACGCAGT TCGCCCGCGA AGGCGTGCGC
TATACCGCCC AGGCTTTCCA ACAGATGCGC GCTTCCCGCA GGCGGGTCAT CCTGCTTGCT
ACGCTGCGCG AGCTGGAGGC CACGCTTACC GACGCGGCGA TCGCCATGTT CGGCACCTTG
ATGGGACGCG CTCATCTTCG TGCCCGCAAA CGCCTGGAAC AGGGGATCGC GATCTCGGGA
CGCGAAGGCC GCGACCGGCT GATGCGCATC GCCACTGTGC TGGAAACAGT TAGCCGGGCA
GCACGTGCCG GTGAAGATAT CGGCGCGGCC CTCAGGGATA TCGTGCCTCT CGACATGCTC
GATGCCGATG CCGCGATCAT CCGTCGTACC GCGGCACCTC ACAGGGACGA TGTGCTAAGC
GAGATCGCAG CCGAGTACCG GACCTTCAAG CGAACAGGAC CTCTATTCCT GCAAACGCTC
GATTTCCACG GTCGAGCCGG CACCGCGGCA TTGCGCAACG CGATGACGGT CCTGTCGGAT
CTTGATGGCA ACTGGCGCAA GCCGCTCCCT GCCGACGTTC CGCTCGGTCA TGTCGAGCGG
CGCTGGCACC GCCATGTCGT GGTCGCCGGC AAGATTGACC GGACGCATTG GGAGATGGCC
ACCTACGGGG CGCTCGCCAA TGCATTGGCA TCCGGTGATA TCTGGGTGCC AAGGTCACGG
CTGCACAGGT CGCTGGACGT GCTGCTCGAG CCATCAAGCG GCGCAGCGTT GCAACCGGCG
TTCTCGCTCG GTGATCCACA CGCATGGCTC GATCAGCGCG CCACGCAACT CGACAACACC
TTACGCGACG TCGCCCAAAA TCTAGCCGGA CGTAATGCTG CCCTGTTCGC TGGCGGGCGA
TTGCGCTTTC CCAAGGAACT GAAGGACGAT GATGCCGGGC ACGACGAAGG ACGGCACCTG
ACGCTTGCCT GCTACGGCAT GCTGCCTGCG ACGCGTATCA CCGACGTACT TTCGCAGGTC
GAACGCTGGA CCGGCTTCAC CCGGCACTTC GGGCACGTCT CGACCGGGTT GCCGCCCGGC
GACGAGCGGA CCTTCCTCGC CACTCTGATT GCCGAAGCGA CCAATCTCGG GTTGTCGCGC
ATGGCCGAGG TATGCGGCGC AGGATCACGC CGCGCGCTGC TGCGCATGCA GACATGGCAC
ATGCGCGAGG AAACCTTTCG AGCGGCGCTC GCCTGTCTGA CCGACGCCAT CCACGCCGAG
CCGATCGCCG CCTGGTTTGG GCAAGGACAC CGGGCTTCTG CAGATGGTCA GGCCTTCTAC
CTGGGCGGGC CGGGCGAAGC CGGAGGAGCG GTCAATGCCC ACTATGGTCG CGACCCGGTG
GTCAAGATCT ACACCACCAT CACCGACCGC TACGCGCCAC TGCACCAGAC CGTGATCGCC
GGCACGGCAG GAGAAGCCAT CCATGCGCTC GACGGCATCC TCGGCCATGA CAGCAACGCC
AATCTGACCG CGCTGCACGT CGATGGAGGC GGTGTTTCCG ACATCGTGTT CGCGACCATG
CATCTCCTCG GGCTCGATTT CGAGCCGCGC ATTCCCCGCC TGTCCGACCG CCGCCTCTAC
GCGTTCGAAC CCTCGAAGCA TTACGGCAGG CTTGCGCCAC TATTCGGTCA CAGGCTCGAC
CGGGACCTGA TCGTTAGCCA CTGGCCGGAT ATTGAACGTG TCATTTGTGC CATGCGCGAC
GGCACCGTTA AGCCCTCGCT GATCCTCAAG AAGCTGTCTG CCTATCGCCA GCAGAACAGC
CTCGCCGCGG CGCTGCGCGA GATCGGGCGG ATCGAGCGCA CGCTGTTCAC GTTGCGCTGG
TTCGAGGATC CGGCTCTGCG CCGTACTGTC ACTGCCGAGT TGAACAAGGG CGAGGCCCGC
AACAGCCTTG CCCGGGCAGT CGCCTTCCAT CGGCTCGGCC GTTTTCGCGA CCGTGGCCTG
GAGAACCAGC AGACCCGAGC AGCCGCGCTC AACCTCGTCA CCGCTGCGAT CATCCTGTTC
AACTGCCGCT ATCTCGGGCG CGCCATTGAC GAAATGCGCC AGCGAGGAAG CCAGATCGAT
CCGGCTATGC TGTCCCGGCT CTCACCGTTG GGATGGGATC GCATCAATCT CACCGGCGAT
TACGTCTGGT CCGATCGCCT CGATCTCGAC GCCAATGGCC TCATGCCGCT GCTCATCAAA
CCGCTACCGT GA
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| Protein sequence | MPARIPMTER QRAALLALPD SEAAVVRHHG LDAEDLAAIG TARTPATRLS YALQLCCLRY
PGRHLRAGEL LPAIMLEHIA EQVGVDAGAI ADFARRAPTR YDQLAAIKAR FGFTDLSRPA
RGIMMTWLET EAMAIVDGRI LLDRLLDELR TRRIVIPGIS VVERMAAEAM LRAETDLVAA
VDDKLDADMR QRLDTLVDEK VHHRQSRLSW LREPEPRVAS ASLAEILEKV ALIHRTGIAC
VPVDPLHEPR LTQFAREGVR YTAQAFQQMR ASRRRVILLA TLRELEATLT DAAIAMFGTL
MGRAHLRARK RLEQGIAISG REGRDRLMRI ATVLETVSRA ARAGEDIGAA LRDIVPLDML
DADAAIIRRT AAPHRDDVLS EIAAEYRTFK RTGPLFLQTL DFHGRAGTAA LRNAMTVLSD
LDGNWRKPLP ADVPLGHVER RWHRHVVVAG KIDRTHWEMA TYGALANALA SGDIWVPRSR
LHRSLDVLLE PSSGAALQPA FSLGDPHAWL DQRATQLDNT LRDVAQNLAG RNAALFAGGR
LRFPKELKDD DAGHDEGRHL TLACYGMLPA TRITDVLSQV ERWTGFTRHF GHVSTGLPPG
DERTFLATLI AEATNLGLSR MAEVCGAGSR RALLRMQTWH MREETFRAAL ACLTDAIHAE
PIAAWFGQGH RASADGQAFY LGGPGEAGGA VNAHYGRDPV VKIYTTITDR YAPLHQTVIA
GTAGEAIHAL DGILGHDSNA NLTALHVDGG GVSDIVFATM HLLGLDFEPR IPRLSDRRLY
AFEPSKHYGR LAPLFGHRLD RDLIVSHWPD IERVICAMRD GTVKPSLILK KLSAYRQQNS
LAAALREIGR IERTLFTLRW FEDPALRRTV TAELNKGEAR NSLARAVAFH RLGRFRDRGL
ENQQTRAAAL NLVTAAIILF NCRYLGRAID EMRQRGSQID PAMLSRLSPL GWDRINLTGD
YVWSDRLDLD ANGLMPLLIK PLP
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