Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5048 |
Symbol | |
ID | 5195880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 163153 |
End bp | 164565 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640579480 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_001260428 |
Protein GI | 148550998 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 0.43218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA TCATCGAACT GCTGCGCGAA CGACTTGGCG AAGCGTCCGT CACTTTGGCA GACGAGATTG AAAGCCGTCA CATGAGTGAC TGGCACGTCC CGGCTGAACC CGGCACCAAG CCGGTCGCGC TGGTACGCCC GCGCACACCC CAGGAAGTAT CAGCGGTACT GGCTGCATGT ACTGAAACCA GAACGCCGGT CGTGCCGCAA GGTGGGCTGA CCGGGCTGGT CGGTGGTGCC ACCGCGATCG ATGGCGCGGT CCTGTTGTCG CTCGACCGGA TGCGAGAGAT CCTCGAACTC GACGCGACAG CCGGCACGAT AACTGTCGAA GCCGGCGTTC CACTTCAGGC GATTCAGGAA GCCGCCGACG CGGTAGATCT CCTCTATCCG CTCGACATCG GATCGCGCGG CTCGTGCCTG ATCGGCGGCA ACGTGGCCAC CAATGCTGGC GGCAACCGGG TGTTGCGCTA CGGGATGACG CGCGATCTGG TATTGGGCAT GGAAGTCGTT CTGGCCGACG GTACGATCGT GACGACGCTC AACAAGATGC TCAAGAACAA CGTGGGCTAC GACCTCAAGC AGTTCTTCAT CGGCAGCGAA GGAACTCTGG GCGTTGTTAC CAAAGTCGTG CTGCGACTGT TCCCCAAGCC GCGCTCCACG GCGACCGCCC TGTGCGCGTT CGACGATTTC GACAACGTCT ACGCCTTTCT GCGCCGGATG CGGGCGGGCT TGGCTGACAC GATGTCGAGC TTCGAAGTGA TGTGGCCGAG CTTTTTCGAA GCGGCGCTGG ACAAAGGCAA CCATCGCCGC CCCTTCGCCG GTCAACACGC CGCTTATGTC CTGCTGGAAA TGATGGGCAC CGATCCTGAG CAGGACGGCG AGCATTTCGA GGCCGTGATC GGTTCGGCCA TTGAGGCGGG CGAGGTGAGT GACGTGGTTT TGGCACAATC GATCGGCGAA GCCGACCGCT TCTGGGCAAT CCGCGATATG TCGGGTGAAC TGGACGGCGC TTTGGCGCCG CTCGTTGCGT TCGACATCAG CATCGAGACC GGAAGGATCG CGGCCTTTCT CGACGAGTGC GAACGCCGAT GCCGCGAGCG CTGGTCGTCG GCGCGGATGT ACAATTTCGG CCATCTGGCT GACAGCAACA TTCACATGTT CGTCACGGTC GAGGAACGTC CGTTTCCCGA ACACGAGATC GAACAGGTCA TCTACGAATG CACGCAAGAC TGGGGTGGAT CGATCTCGGC AGAGATCGGC ATCGGACTGC TCAAGCGGCC CTATCTCGCC TATTCGCGAA GCGAGGCAGA AATTGCGCTG ATGCGGCGGG TGAAGTCGGC GCTTGATCCC CTGAACATCC TCAACCCTAC CAAGGTCTTT GAACCGCTGG ACATCAAACT CGCGGCAGAA TGA
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Protein sequence | MADIIELLRE RLGEASVTLA DEIESRHMSD WHVPAEPGTK PVALVRPRTP QEVSAVLAAC TETRTPVVPQ GGLTGLVGGA TAIDGAVLLS LDRMREILEL DATAGTITVE AGVPLQAIQE AADAVDLLYP LDIGSRGSCL IGGNVATNAG GNRVLRYGMT RDLVLGMEVV LADGTIVTTL NKMLKNNVGY DLKQFFIGSE GTLGVVTKVV LRLFPKPRST ATALCAFDDF DNVYAFLRRM RAGLADTMSS FEVMWPSFFE AALDKGNHRR PFAGQHAAYV LLEMMGTDPE QDGEHFEAVI GSAIEAGEVS DVVLAQSIGE ADRFWAIRDM SGELDGALAP LVAFDISIET GRIAAFLDEC ERRCRERWSS ARMYNFGHLA DSNIHMFVTV EERPFPEHEI EQVIYECTQD WGGSISAEIG IGLLKRPYLA YSRSEAEIAL MRRVKSALDP LNILNPTKVF EPLDIKLAAE
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