| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5040 |
|---|
| Symbol | |
|---|
| ID | 5196019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 152510 |
|---|
| End bp | 153292 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640579472 |
|---|
| Product | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
|---|
| Protein accession | YP_001260420 |
|---|
| Protein GI | 148550990 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 0.444899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCA ACGACGATCT ACGGCGCGCT GCGGATGCCA TTCTGGACGC GGACCGGAGC
AAAGTCCCGA CCCCGCAACT GTCCAGGCTG TTTCCGTCCA TGACGCTGGA AGACAGCTAC
AGGGTGCAGG ATCTGTGGGC GCAATCGCGG ATCGACAGTG GCGCGACGGT GGTGGGGCAC
AAGATCGGCC TGACCAGTCG CGCGATGCAG ATGGCGTCCA AGATGACCGA ACCGGATTAC
GGTCGTATCC TCGACGACGC GCTGTACAAT GACGGCGCGG CGATCGCGCG GGACAGGTTC
ATCAAGCCGC GGCTCGAAGT CGAGCTGGCG TTCATCATGG GCGAGGATCT TTCCGGTCCC
GGCAAACGCA TTTATGACGT GATGCGCGCG ACCGAAGCCA TCGTCCCGGC GCTGGAGATC
ATCGATTATC GTACCGAGGT GCCACGCATG ATCGTCGACA CCATTGCGGA CAATGCGGCT
TTCGGTGCGA TCGTTGTCGG CGGTCGGCCC GTTCGTCCTT ACGATATCGA TGTGCGCTGG
GTCGGAGCGA CGCTGTCGAA GAACGGCATA ATCGAGGAAT CGGGCGTCTC TGCCGCGATC
ATGGGGCATC CGGCTGCAGG CGTCGCCTGG CTGGTCAACA AGCTCCATGC CGTGGGATCG
GGCCTGAAGA AGGGGCAGAT CATCCTGGGC GGATCGTTCA CGCGACCTGT GGACATCGAT
GCCGGGGACG TGATCCACGC CGACTATGGG CCGCTCGGCG CCATCGGGAT ATCTTTCACC
TGA
|
|---|
| Protein sequence | MLTNDDLRRA ADAILDADRS KVPTPQLSRL FPSMTLEDSY RVQDLWAQSR IDSGATVVGH
KIGLTSRAMQ MASKMTEPDY GRILDDALYN DGAAIARDRF IKPRLEVELA FIMGEDLSGP
GKRIYDVMRA TEAIVPALEI IDYRTEVPRM IVDTIADNAA FGAIVVGGRP VRPYDIDVRW
VGATLSKNGI IEESGVSAAI MGHPAAGVAW LVNKLHAVGS GLKKGQIILG GSFTRPVDID
AGDVIHADYG PLGAIGISFT
|
|---|
| |