Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5039 |
Symbol | |
ID | 5196035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 151271 |
End bp | 152503 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640579471 |
Product | major facilitator transporter |
Protein accession | YP_001260419 |
Protein GI | 148550989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 0.582294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCG AGAACCGCCG CTACGAACGA ATCGCGACCG CCGTGCTGGG ACTGACGTTC GGCATCGTCT TCTTCGACCG CAACGCGCTG AATTTCCTGA TGCCGTTCAT CCTGCGCGAC ATTGCGTTGA CCAACACGCA GATCGGCCTC GCCGCCTCCG GGCTGGCTTT GACATGGGCA TTGTCGGGCA TGATGATCGG CAGGCTTTCG GACCGGATCG GTCGACGCAA GCCGCTCCTC ATCGGCGCCG TCCTGGCCTT TTCAGCCTCC TCCTTCGTGA CGGGCATCAC CTGGTCGTTC GCCACGCTGC TGGGCGCGCG CCTGCTCATG GGCCTTGCCG AAGGGCCGGT GCTGCCGATC TCGCAGACGC TGATGGCCGC TGCCTCGTCG CCGGAACGGC GCGGTCGCAA CATGGGCCTG ATGCAGAATG TACTCAGCAA CCTGATGGGC AGCCTCGTCG CGCCGCTCGT CGTCGTCGCG CTGGCGACCA GCTATGGCTG GCGGTACGCC TTCTTTCTGA CCGCCCTCCC CGGCTTCGTC GCGGCTGCGC TGATCTGGCG CTACATCGAG GAACCGGAAC CGCGTGCGCG ACAGGCTGCG GATCGTTCAG ACCAACAGGC CTCGGTGCGC GATGTGCTGC GCCATCGCAA CATCAGGCTC TGCCTCTTCA TCAGTCCGCT GATCGTGGGC TGGATGATCA GTGGATGGGT GTTCCTGCCC ATCTATTTCA CCTCCGTCGC CGGATTCACG CCGACGCAGA TGAGCGCGCT GCTCAGCGTT CTGGGCCTTA CGGGAGCGAT CGCTGGTTAT CTCGTACCGG CACTTTCCGA CCGTTTCGGA CGGCGGCTGG TGGTGGCAGC CGGATGCCTG CTCGGCATCC TGACCCCTCT GGCCGCCATG TGGGGCGTGC ATTCCGGCGC TGTAGCGATA GCCGTGCTGG TCGCGACCGG GTGGATGGCA GGCGGCACCA TCTCGATCGT GATGGCGACG ATCCCGGCAG AAAGCAGCGA CGCCGGACAG GTCACCACCG CGATGGCGCT CGTCATGGGA TCTGGCGAAC TGTTCGGCGG CACCCTGGCC CCGACCATCG TCGGCTGGAC CATGGACCGT TGGGGCCCGA CGGCACCCTT GATGGGTCAG GTGATCATGA TCGCCAGCGC GAGCGTTCTG GCGCTGTTCC TGCGCAATAC GACATCACGC CGCATCGCGC TGGACAGCCA CCACGCCGCT TGA
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Protein sequence | MEAENRRYER IATAVLGLTF GIVFFDRNAL NFLMPFILRD IALTNTQIGL AASGLALTWA LSGMMIGRLS DRIGRRKPLL IGAVLAFSAS SFVTGITWSF ATLLGARLLM GLAEGPVLPI SQTLMAAASS PERRGRNMGL MQNVLSNLMG SLVAPLVVVA LATSYGWRYA FFLTALPGFV AAALIWRYIE EPEPRARQAA DRSDQQASVR DVLRHRNIRL CLFISPLIVG WMISGWVFLP IYFTSVAGFT PTQMSALLSV LGLTGAIAGY LVPALSDRFG RRLVVAAGCL LGILTPLAAM WGVHSGAVAI AVLVATGWMA GGTISIVMAT IPAESSDAGQ VTTAMALVMG SGELFGGTLA PTIVGWTMDR WGPTAPLMGQ VIMIASASVL ALFLRNTTSR RIALDSHHAA
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