Gene Swit_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5038 
Symbol 
ID5195886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp150830 
End bp151177 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content59% 
IMG OID640579470 
Producthypothetical protein 
Protein accessionYP_001260418 
Protein GI148550988 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value0.799409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.881755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC TTTTCTGGCT GACAGACGAG CAGATGGCTC GGCTTCAGCC ATTCTTTCCC 
AAGAGCCATG GCAGGCCGCG CGTTGATGAT CGGCGGGTGC TGAGCGGGAT CATCTTCGTC
AATCGCAATG GGTTGAGGTG GCGTGACGCG CCCAGGGAGT ATGGTCCGGC AAAGACGCTT
TATAACCGCT GGAAGCGATG GGGAGACATG GGTGTCTTCA TCGCGATGAT GGACGGCCTG
TCTGCCAAGG GCAGCGAGCG CAAGACGATC ATGATCGACG CGACCTATCT CAAAGCACAC
CGCACGGCTT CGAGCCTGCG GGTTAAAAAG GGGGTCTTGG GCGCCTGA
 
Protein sequence
MSDLFWLTDE QMARLQPFFP KSHGRPRVDD RRVLSGIIFV NRNGLRWRDA PREYGPAKTL 
YNRWKRWGDM GVFIAMMDGL SAKGSERKTI MIDATYLKAH RTASSLRVKK GVLGA