| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5031 |
|---|
| Symbol | |
|---|
| ID | 5196017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | + |
|---|
| Start bp | 145949 |
|---|
| End bp | 146296 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640579463 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260411 |
|---|
| Protein GI | 148550981 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 0.212133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.750276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC TTTTCTGGCT GACAGACGAG CAGATGGCTC GGCTTCAGCC ATTCTTTCCC
AAGAGCCATG GCAGGCCGCG CGTTGATGAT CGGCGGGTGC TGAGCGGGAT CATCTTCGTC
AATCGCAATG GGTTGAGGTG GCGTGACGCG CCCAGGGAGT ATGGTCCGGC AAAGACGCTT
TATAACCGCT GGAAGCGATG GGGAGACATG GGTGTCTTCA TCGCGATGAT GGACGGCCTG
TCTGCCAAGG GCAGCGAGCG CAAGACGATC ATGATCGACG CGACCTATCT CAAAGCACAC
CGCACGGCTT CGAGCCTGCG GGTTAAAAAG GGGGTCTTGG GCGCCTGA
|
|---|
| Protein sequence | MSDLFWLTDE QMARLQPFFP KSHGRPRVDD RRVLSGIIFV NRNGLRWRDA PREYGPAKTL
YNRWKRWGDM GVFIAMMDGL SAKGSERKTI MIDATYLKAH RTASSLRVKK GVLGA
|
|---|
| |