Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5015 |
Symbol | |
ID | 5196006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 132216 |
End bp | 132587 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640579448 |
Product | IS4 family transposase |
Protein accession | YP_001260396 |
Protein GI | 148550966 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0619203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGG TCGATGCGCT GGGCAATCTG GTGCGCTTTG TCCTGATGCC GGGGCAACGC AACGACCTCA TGGGCGTCAG GCCGCGGATC GATGGCATTT CGTTCGATGC CCTGCTCGCG GACAAAGCCT TCGATGCCAA CTGGCTGCGC GCAGCCATCT TTGAACGTGG CGCAAAAGCC GTGATCCCCT CGCGAAAGAA TCGCAAAACT CAAATCGACT TCGACGCCGA GATGTATAAA TGGCGCCATC TGGTCGAAAA CTACTTCGCC AAAATCAAGG AGTTCCGTGG CATTGCGACC AGATATGACA AAACCGACGA CAGCTTTCGC GCCAACATCA ATCTGACCGC TACACTCATC GCTTGTCGGT AA
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Protein sequence | MAMVDALGNL VRFVLMPGQR NDLMGVRPRI DGISFDALLA DKAFDANWLR AAIFERGAKA VIPSRKNRKT QIDFDAEMYK WRHLVENYFA KIKEFRGIAT RYDKTDDSFR ANINLTATLI ACR
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