| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5003 |
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| Symbol | |
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| ID | 5196091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 120555 |
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| End bp | 121412 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579438 |
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| Product | P-type conjugative transfer protein VirB9 |
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| Protein accession | YP_001260386 |
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| Protein GI | 148550956 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 0.341175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.712653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCC TTCTCTCCAT CGCGAGCCTT CTCACCATAA TAGCGACACC CGCCCTCGCG
GAGGACACCC CGCGCGGTGG GCCGGCGGAT CCGCGCGTGA AGTTCGTCGA ATATCAGGAG
ACCCAGGTCT ACCGGATCGT CGGCACATTT CGGACGGCGA CCCAGGTGGT GCTCGGGGCC
GACGAGACGA TCGAACATGT CGCGCTCGGC GACACCGTCT CATGGGAAGT GGCGGTTGCC
GGTCATATCC TGTTCCTGAA ACCCCGCGAG CGGGCGGGAC CGACCAACCT CATCGTCACG
ACCAATCGCG GGGGCGAACT GCGCAACTAC GCCTTCGAAC TGACCGCGCG CCGGGGACCG
ATCGGCAGCG GGAGCCGTGA CACATTCTTC CAGGTTCGGT TTCGCTACCC GCGCGATGAG
GCCGATCGTG CCGCGCGCAT GCGCGCCACC CAGGAGGCGC AGCGCGTCGC CGCGCTGCAG
GCGAGTGCCG TTCGGGGCGC TCTTGACCAT GGCGTCATCG ATGGACCGCG CAATTTGAAC
TACAAGGTCC AGGGTGCGAG CGACCTTCAG CCGTCGGAGA TCTCCGACAA TGGCCAGTTC
ACGGTCCTGC GTTTCCCCGG CAACCATGAA ATCCCGGCGA TCTATCTGGT GCGACCGGAC
GGCTCGGAGT CCTTGGTCCC GTTCGATGTC CGCGACGAGT TCGTGGTCGT CCACGCCGTG
GCGGCTCAAC TGCGCCTGCG CCGGAACCGG GAGGTGCTGT GCATCTATAA TCTCGCGCCG
ACACCTTATG GCGTCGATCA CGGCACCAAC ACCGCATCGC CGCATGTCGA GCGCACCATA
CAAGACCCGA AGGAGTGA
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| Protein sequence | MKRLLSIASL LTIIATPALA EDTPRGGPAD PRVKFVEYQE TQVYRIVGTF RTATQVVLGA
DETIEHVALG DTVSWEVAVA GHILFLKPRE RAGPTNLIVT TNRGGELRNY AFELTARRGP
IGSGSRDTFF QVRFRYPRDE ADRAARMRAT QEAQRVAALQ ASAVRGALDH GVIDGPRNLN
YKVQGASDLQ PSEISDNGQF TVLRFPGNHE IPAIYLVRPD GSESLVPFDV RDEFVVVHAV
AAQLRLRRNR EVLCIYNLAP TPYGVDHGTN TASPHVERTI QDPKE
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