Gene Swit_4981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4981 
Symbol 
ID5196012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp93853 
End bp94581 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content63% 
IMG OID640579417 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001260365 
Protein GI148550935 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC ATGATATGAT CGAGGCCATG CGCGGCCTTG GTCTCAAAGG CATGGCGGGC 
GCGTTCGACG ATGCCGTCAC CACCGGCCTT CAGCGCCAGC GCACCACCAT GGAGATACTG
ACCGACCTCC TGCGAGCGGA GGCGACGCAT CGTCATGCCG CGTCGATCCG ATACCGGATG
GCCGCTGCCA AGCTGCCAGT CGTAAAGGAC ATCGATGCCT TCCGGTTCGA GGGTACCCCG
ATCAACGAGG GGCTTGTGCG TTCATTGCAC AGCGGCGCGT TCCTGCCCGC ACGGCGCAAT
ATCGTCCTGG TCGGCGGAAC AGGCACCGGC AAGACCCATC TGGCCATCGC CATCACCGCC
AACGTTGTGC GCTCCGGCGC CCGAGGCCGC TACTTCAACA CGGTCGATCT GGTGACCCGC
CTCGAAGAGG AGGCCAGGAT CGGCAAGAGT GGCGCTCTCG CCGCCCAGCT ATCCCGTCTC
GATCTGATCG TGCTCGATGA ACTGGGCTAT CTGCCGTTCG CCCGATCAGG CGGCCAGCTG
CTGTTCCACC TGATCAGCAA ACTCTATGAG CAGACCAGCG TCATCATCAC CACCAACCTC
GCCTTTGGCG AGTGGCCCAC CGTGTTCGGC GATCCCAAGA TGACCACCGC GCTCCTCGAC
CGCGTCACCC ATCATTGCGA CATCGTCGAG ACCGGCAATG ACAGCTGGCG CTTCAAAAAC
CGCAGCTGA
 
Protein sequence
MQRHDMIEAM RGLGLKGMAG AFDDAVTTGL QRQRTTMEIL TDLLRAEATH RHAASIRYRM 
AAAKLPVVKD IDAFRFEGTP INEGLVRSLH SGAFLPARRN IVLVGGTGTG KTHLAIAITA
NVVRSGARGR YFNTVDLVTR LEEEARIGKS GALAAQLSRL DLIVLDELGY LPFARSGGQL
LFHLISKLYE QTSVIITTNL AFGEWPTVFG DPKMTTALLD RVTHHCDIVE TGNDSWRFKN
RS