| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4923 |
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| Symbol | |
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| ID | 5196013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 35547 |
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| End bp | 36572 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640579362 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_001260310 |
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| Protein GI | 148550880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 0.854205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCG ATCCCAACAT GCAAAAGCTC TATATTCAAG ACGTCACCCT GCGCGACGGG
ATGCATGCGA TCCGCCACCA GTATGGCCTC GATCATGTCC AGGCGATCGC CCGCGCACTC
GACCGGGCCA AGGTCGATGC GATCGAGGTC GCGCATGGCG ACGGCCTGCA GGGCTCAAGC
TTCAACTACG GCTTTGGTGC CTACACCGAC TGGGACTGGA TCGGCGCAGT TGCCGAAGTG
CTCGAGCATT CGGTGCTCAC CACACTGCTG CTGCCGGGTA TCGGCACGGT CCACGATCTG
AAGCACGCTT ACGAGATGGG TGTGCGCTCG GTCCGCATCG CGACGCACTG CACCGAGGCC
GATGTCAGCA AGCAGCATAT CGAGGCCGCC CGCAATCTCG GCATGGATGT CTCGGGCTTC
CTGATGATGA GCCACATGAT CGATCCCGAG GCGCTTGCTG AGCAAGCGCT GCTGATGGAA
AGCTACGGGG CACACTGCGT CTACGTCACC GACAGCGGCG GGGCGATGAA CATGGATGAA
TACGCCGCGC GTTGCCAGGC CTATGACCGG GTTCTCAAAC CCGAGACCCA GCGTGGTGTT
CACGCTCACC ATAACCTCAG CTTGGGCGTC GCCAACTCGA TCGTGGCGGT GCAGAACGGT
GTGGTCCGGG TCGATGCCAG CCTGGCCGGG ATGGGCGCTG GCGCGGGCAA TGCCCCGCTC
GAAGTGTTTA TCGCCGCTGC CGACCGGATG GGCTGGAACC ACGGTTGCGA CTTGTTCGCA
CTGATGGATG CGGCCGAGGA TCTTGTCCGT CCGTTGCAGG ACCGCCCCGT CCGTGTCGAC
CGCGAGACGC TGACGCTGGG CTATGCCGGG GTCTATTCCA GCTTCCTGCG TCACGCGGAA
AAGGCCAGTA GCGATTACGG TGTGGATACC CGTTCGATCC TGGCCGAAGT GGGCCGCCGC
AAGATGGTTG GCGGACAGGA AGACATGATC GTCGATATCG CGCTGGACAT GGTAAAAGCG
CGATGA
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| Protein sequence | MSFDPNMQKL YIQDVTLRDG MHAIRHQYGL DHVQAIARAL DRAKVDAIEV AHGDGLQGSS
FNYGFGAYTD WDWIGAVAEV LEHSVLTTLL LPGIGTVHDL KHAYEMGVRS VRIATHCTEA
DVSKQHIEAA RNLGMDVSGF LMMSHMIDPE ALAEQALLME SYGAHCVYVT DSGGAMNMDE
YAARCQAYDR VLKPETQRGV HAHHNLSLGV ANSIVAVQNG VVRVDASLAG MGAGAGNAPL
EVFIAAADRM GWNHGCDLFA LMDAAEDLVR PLQDRPVRVD RETLTLGYAG VYSSFLRHAE
KASSDYGVDT RSILAEVGRR KMVGGQEDMI VDIALDMVKA R
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