| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4913 |
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| Symbol | |
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| ID | 5195961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 25042 |
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| End bp | 26328 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579353 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001260301 |
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| Protein GI | 148550871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.279769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTG TGATCACAGA GTTTCCTGCA CGGACATTGG CTGTGCAGGG AGAGGAGATG
CTTCAACCCG ACGAGGTGGC CGCGATGGTG CGGTTGCATG AGCTTGGTTG GGGAGCCAAG
CGGCTGTCGA AGGAGTTCGG CTGCGCGCGC AACACGGTAC GGCGCTATCT CCGCGCCGGC
GGCGTTGTAC CATTCGCGAA GCCGGCGCGT AAATCGGCGT TCGACGGGCT CGACGACTGG
CTGCGCGAGC GCTTTTTTCG GCATGGCGGC AATGCCGATG TCGTGCGCCA GGAGCTGGCG
AGCGAGCACG GGATCGTGAT CGGCCTGCGG TCGGTCGAGC TTCGGGTTCA GCGCTGGCGA
CGTGAGCTGA AGGCGCAGAA GCGGGCCACA GTGCGCTTCG AGACGCGGCC GGGGCATCAG
CTACAAATCG ACTTTGGCGA GTCCAAAGTG TGGATCGGCG ACGAGCGTGT GCGGGTGCAT
CTGTTCGTGG CGACGCTGGG CTACTCGCGC CGGATGCACA TCCGCCCCTC GATCCGCGAG
CGCCAGGTGG ACTGGTTCGA AGGCATGGAA GGCGCGTTCC TGCGGTTCGG CGGCGTGCCG
GCGGAAATCC TGTTCGACAA CGCCAGGGCG CTGGTCGAGC ATCATGACGC GGCGACGCGG
GAAGTGCGGT TCAACGGCCG GCTCCACGCC TTTGCCCGCT ATTGGGGCTT CTCGCCGAGA
GCTTGCGCGC CGTACCGGGC GCGCACCAAG GGCAAGGACG AACGCGGCGT CGGGTACGTG
AAGCGCAACG CCATTGCCGG CCGCCGCTTC GCCAGCTGGG GCGCCTTCGT CGCGCACCTC
GAGCAATGGA ACCGCGAGAT TGCCGACGTA CGTGTGCACG GGACGACCGG CGAACTGCCG
CTCGTCCGCT TCGCCGACGA AGCCGCCGCC CTGCGTCCGC TCGGTGGCCG TGCTCCGTTC
GGCCAGCTGC GCGACCTGGT TCGCAAGGTG CGGCCCGACT GTGCCATCGA CCTCGACACC
AACAGCTACT CGGTACCCTG GCGCCTGGTC GGCGAGACCG TGCAGGTCGT GGTCCTCGCC
GGTCGCGTCA TCGTGCGCCA TGCTGGCGAG GTCGTGGCCG ACCATCCCGT GTGCGACGGG
CGTCGGCAGC GGGTGGTCGA TCGGGCTCAT CTTGCGGGTC TGGTGGGCAC CGGTCCCTTC
CGCGTGACGG CATCGCCGCC GACGCCACCG CCGGCCTTGC TGCGCCCCCT CGCCGAGTAT
GAAGCCGTGG TCGGAGGGGG TTGGTGA
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| Protein sequence | MTTVITEFPA RTLAVQGEEM LQPDEVAAMV RLHELGWGAK RLSKEFGCAR NTVRRYLRAG
GVVPFAKPAR KSAFDGLDDW LRERFFRHGG NADVVRQELA SEHGIVIGLR SVELRVQRWR
RELKAQKRAT VRFETRPGHQ LQIDFGESKV WIGDERVRVH LFVATLGYSR RMHIRPSIRE
RQVDWFEGME GAFLRFGGVP AEILFDNARA LVEHHDAATR EVRFNGRLHA FARYWGFSPR
ACAPYRARTK GKDERGVGYV KRNAIAGRRF ASWGAFVAHL EQWNREIADV RVHGTTGELP
LVRFADEAAA LRPLGGRAPF GQLRDLVRKV RPDCAIDLDT NSYSVPWRLV GETVQVVVLA
GRVIVRHAGE VVADHPVCDG RRQRVVDRAH LAGLVGTGPF RVTASPPTPP PALLRPLAEY
EAVVGGGW
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