| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4902 |
|---|
| Symbol | |
|---|
| ID | 5195980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | + |
|---|
| Start bp | 17011 |
|---|
| End bp | 17895 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640579343 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_001260291 |
|---|
| Protein GI | 148550861 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
|---|
| TIGRFAM ID | [TIGR03213] 2,3-dihydroxybiphenyl 1,2-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 0.671705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.255308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAA AACAACTTGG CTACCTTATT TTTGAATGTA GGGCTGATGT TCTGGAGCAA
ATGGTAGTCG TATACCAAGA TATCATCGGT GCTGTGGTGG AGCGTGATGA AGGCGGACGC
GCTCTTGTTC GCCTTGATGG CCGACCTTTC CGTATCAGGC TCGATCCTGG CCCCGCAAAC
CGCCTTGCGG CGATCGGTTG GAATGTAGAC CCTAGTGATC TGGCGGCGAT AGCGGAACAG
GTGGAGAAGG CATGTTATTC GGTCGTAACG GCTGATGCGG AACTGGCCGC AGATCGCGCG
GCCGCCCAAG TTCGACAGTT CGCCGATAAC GATGGCTTTA CCCATGAACT GTATGTCGAA
TCGTCGTTTC CCACCGACCC TGTGCTCGAG TCTCTATTCG TCTGTGGTGA AGAAGCGAAC
GGCATCTTCG GCTTGGGGCA CCTCGTAGTG ATCGTGGCTG ATCGGGCGAA GACTCAATCT
TTTTTCACTG ATGTTCTGGG CTTCGGACTC AGTGATCGGG TAACTTGGCC TGAAGCCGAC
ATCTTCTTCC TTCACTGCAA CCAGCGTCAT CACACCGTTG CACTTTCGGC ACCGGCGCTC
GGTCTTAAGC CAGGTATGGT TCATCATCTG ATGCTAGAAG CCAAGAGCAA AGAGCAGGTT
GATCGCGCGT TCGCAGCGGT CAAGCGCTTG GGCTATGATG TCCTCATGAC AATTGGCCAG
CACTCCAATG ATAAGGTCTA CTCCTTCTAC ATGATGGCAC CGGCTGGTTT TGCAGTTGAG
TTGGGCTTTG GTGGCCAGGT GATTGGAGAT TTGGAAAGTT GGCATGTTGG ATTCTATGAC
GCACCGAGCA TTTGGGGCCA CGAGTTGCAG TTGCCGGCGC ATTGA
|
|---|
| Protein sequence | MSVKQLGYLI FECRADVLEQ MVVVYQDIIG AVVERDEGGR ALVRLDGRPF RIRLDPGPAN
RLAAIGWNVD PSDLAAIAEQ VEKACYSVVT ADAELAADRA AAQVRQFADN DGFTHELYVE
SSFPTDPVLE SLFVCGEEAN GIFGLGHLVV IVADRAKTQS FFTDVLGFGL SDRVTWPEAD
IFFLHCNQRH HTVALSAPAL GLKPGMVHHL MLEAKSKEQV DRAFAAVKRL GYDVLMTIGQ
HSNDKVYSFY MMAPAGFAVE LGFGGQVIGD LESWHVGFYD APSIWGHELQ LPAH
|
|---|
| |