Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4857 |
Symbol | glyQ |
ID | 5198857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5349680 |
End bp | 5350555 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640584414 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_001265332 |
Protein GI | 148557750 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCGACCA AGCCGCTATC GTTCCAGCGC CTGATCCTGA CGCTCCACGA CTATTGGAGC GACCAGGGCT GCCTGATCCT CCAGCCGTAC GACATGGAGA TGGGCGCGGG TACCTTCCAT CCCTCGACCA CGCTGCGCGC GCTCGGGCCG CAGCCGTGGA AGGCGGCCTA TGTCCAGCCG TCGCGCCGCC CGACCGACGG CCGCTATGGC GAGAACCCCA ACCGGCTCGG CCATTATTAC CAGTATCAGG TGATCCTGAA GCCGTCGCCC GCCAACCTGC AGGAGCTCTA TCTCGGCAGC CTGGAGCGGA TCGGCATCGA CCCGCTCGCG CACGACATCC GCTTCGTCGA GGACGATTGG GAGAGCCCGA CGCTCGGCGC CTGGGGCCTC GGCTGGGAAG TGTGGTGCGA CGGGATGGAG GTGACCCAGT TCACCTATTT CCAGCAGGTC GGCGGCTTCG ACTGCAAGCC GGTCGCGGGC GAGCTGACCT ATGGGCTCGA ACGGCTGGCG ATGTACATCC AGGGCGTCGA CCGGGTCTAT GATCTCGCCT TCAACGACGA GGGCGTCACC TATGGCGATG TCTTCCTGGA GAATGAGCGC CAGTTCAGCG CCTATAATTT CGAGGCCGCG AACACCGACA CGCTGTTCAA GCAGTTCACC CAGGCCGCCG ACGAGTGCCG CGCCCTGCTC GAACGCGACA GGCCCTTGCC GCTGCCCGCC TATGACCAGG CGATCAAGGC CAGCCACATC TTCAACACCC TCCAGGCGCG CGGCGTGATC TCGGTCGCCG AGCGCCAGGC CTATATCGGC CGCGTCCGTG ACCTGGCGAA GGGCGCCTGC GCCGCCTGGA TGGCGCATAA CGGGTGGGAG GCCTGA
|
Protein sequence | MATKPLSFQR LILTLHDYWS DQGCLILQPY DMEMGAGTFH PSTTLRALGP QPWKAAYVQP SRRPTDGRYG ENPNRLGHYY QYQVILKPSP ANLQELYLGS LERIGIDPLA HDIRFVEDDW ESPTLGAWGL GWEVWCDGME VTQFTYFQQV GGFDCKPVAG ELTYGLERLA MYIQGVDRVY DLAFNDEGVT YGDVFLENER QFSAYNFEAA NTDTLFKQFT QAADECRALL ERDRPLPLPA YDQAIKASHI FNTLQARGVI SVAERQAYIG RVRDLAKGAC AAWMAHNGWE A
|
| |