| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4792 |
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| Symbol | |
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| ID | 5197954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5276288 |
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| End bp | 5277760 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584349 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001265267 |
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| Protein GI | 148557685 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.118224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.264382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAT TTGCGAAGAT TTGCGGAGAG TTGTCCGCAG ATTTGCAAAT TTTGCGAAGA
TCGGATCGGG CGATGCGGAA GGCCTATATG GGCGTGCGGC TGAAACGGCT GCGCGAGGAA
CGGAACCTCA AGCAGGTCGA GCTGGCCAAT GCGCTCGGCA TCTCGTCGAG CTACCTCAAC
CAGCTGGAGC AGAACCAGCG GCCGCTGACG GTGCCGGTGC TGCTCAAGAT CAACGCGGCG
TTCGGCATCG ACGTGCAGCT CTTCTCGGAG GACGAGGAGG CGCGCCTCAT CACCGAGCTG
CGCGACGCGC TGGCGGAAGG ATCGGAGAGC GTCTCGATCG CCGAGATCCG CGAGCTGGCG
ATGAACATGC CCGCGGTGGG CCGCACGCTC GTATCGCTCC ATCGCCGCTA CCGCGAGTCG
GTCGAGCGCG GCGAGGCGAT GGCGGCGCAG CTCGGCGACG ACTGGATCGC GGGCGGCCCG
GCGCGGATGC CGTTCGAGCA GGTGCGCGAT TTCTTCTACG CGCGGCACAA CCATGTCGAG
CCGCTGGACG AGGCGGCGGA GCGGCTCTAC CGGCAGGCCA ATCTGGGGCC GCGATCGGTG
CACCAGGGGC TGGTCGCCTG GCTGCGGGAG CGGCACGGCG TCCAGATCGT CTGGGACGAG
GGCGGCGACG CGCAGCGGCA TTATGACCCG GTCCGCCGCA TCCTCCATCT CTCGGCCGAC
CTGCGGCAGG GGCAGCAGGC TTTCCAGATG GCGACCCAGC TCGCCTTCCT CGAACTGGGC
GACGTCATCG GGCGGCTGTC GGACAGCAGC ATCCTGACGG GCGACGAGGC GCGGCGGCTC
GCGCGGGTCG GGCTCGCCAA TTATTTCGCG GGGGCGCTGA TCCTGCCCTA TGGCGACTTC
CTCGCCGCCG CCGAGGCCGA GGGCTATGAC ATTGCGAAGC TCGGCCGACG CTTCGGCGTC
GGGTTCGAGA CGATCTGCCA TCGCCTCTCG ACCCTGCAAC GCCCCGAGGC GCGTGGCGTC
CCCTTCTTCT TCGTTCGGGT CGATCGTGCC GGCAACATCT CGAAGCGCCA GTCGGCGACC
GACTTCCACT TCTCGCGCGT CGGCGGAAGC TGCCCGCTGT GGAACGTCTA TGAGGCCTTC
GCCCAGCCGG GCCGGCTATT GACCCAGATT GCCCAGATGC CGGACGGCCG CAGCTATCTG
TGGATCGCGC GGACGGTGGA CCGGGGGAGC GCCGGCTACG GCATGCCGGG CAAGAGCTTC
GCGGTCGGCC TCGGCTGCGA CATCCGCCAT GCCGGCCGGC TGGTCTATTC GCGCGGCCTG
GACCTGACCG ATCCGGCGGC GGCGACGCCG ATCGGCGCGG GCTGCAAGGT CTGCGAGCGG
CCGGCCTGCC CGCAGCGGGC CTTTCCGCCG ATCGGCCGGC CGGTGGCGAT CGACGAGAAT
CGCAGCGCGC CCACGCCCTA TCCGGTCGCC TGA
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| Protein sequence | MRRFAKICGE LSADLQILRR SDRAMRKAYM GVRLKRLREE RNLKQVELAN ALGISSSYLN
QLEQNQRPLT VPVLLKINAA FGIDVQLFSE DEEARLITEL RDALAEGSES VSIAEIRELA
MNMPAVGRTL VSLHRRYRES VERGEAMAAQ LGDDWIAGGP ARMPFEQVRD FFYARHNHVE
PLDEAAERLY RQANLGPRSV HQGLVAWLRE RHGVQIVWDE GGDAQRHYDP VRRILHLSAD
LRQGQQAFQM ATQLAFLELG DVIGRLSDSS ILTGDEARRL ARVGLANYFA GALILPYGDF
LAAAEAEGYD IAKLGRRFGV GFETICHRLS TLQRPEARGV PFFFVRVDRA GNISKRQSAT
DFHFSRVGGS CPLWNVYEAF AQPGRLLTQI AQMPDGRSYL WIARTVDRGS AGYGMPGKSF
AVGLGCDIRH AGRLVYSRGL DLTDPAAATP IGAGCKVCER PACPQRAFPP IGRPVAIDEN
RSAPTPYPVA
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