| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4760 |
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| Symbol | |
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| ID | 5198152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5240693 |
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| End bp | 5241571 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640584316 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001265235 |
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| Protein GI | 148557653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0619763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0424651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTACC AGGTCCGCCA CCGCACCCTG TTCCGCTACG CCTATCCGGT CGCCTTCGCG
CGCTGCAACC TGCGCCTCCA GCCGGTCGAC TGGGCGGGGC AGCGGCTGGA GAGCTTCCGG
CTGCGCCTGT CGCCGGGCTC CCGCGTCACC GGCACGCGGC CGACCGGCTA TCTCGGCCAT
GTCACCCGCA TGGTGGTGGA GAAGCCGTCG CGCGAGCTGG AGATCGAGAG CCGCTTCCGT
ATCCGCGTCG ACCGGCCGGT GCCGATGCCG CTGCCCGGCG ACGCGACCGT GGCCGAGGTC
GCCGCCGCGG CGCGCGTCAC GCTCGACATC GGCGTGGAGA GCCCGGCCAA CTTCATCTAT
CCGTCGCCGT CGATCCCGCT CAGCGCGGCG ATCACCGCCT GGTGCTCCGA ACTGCTCGAT
CCCGATCGCG GGGTGGTCGA GGCGGGGCTG GCGCTCGCCA CCCGCATCCA CGACCGCTTC
ACCTATGACG GCAGCGCGAC GACCGTCGAC ACCAGCCCGG CCGAGGCGTT CGAGAAGCGC
CACGGCGTCT GCCAGGATTT CGCCCAGATC ATGATCGCCG GCCTGCGCGG CGTCGGGGTG
CCGGCGGCCT ATGTCTCGGG CTATCTGCGC ACCATCCCGC CGCCCGGCCA GCCGCGCCTG
GTGGGCGCCG ACGCGACCCA TGCCTGGGTT GTGATCTGGT GCGGGGCGGA GCGCGGCTGG
CTGGGCTTCG ACCCGACCAA CGCCTGCCTG GTGGGCAGCG ACCATATCGT CACCGCCATG
GGCCGCGACT ATGCCGACGT CGCGCCGATC GACGGGGTGT TCACCGGGCA GGAAGGGCAG
AAGATCGACG TCGCGGTCGA CGTCGAGCCG GTGGGGTAG
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| Protein sequence | MLYQVRHRTL FRYAYPVAFA RCNLRLQPVD WAGQRLESFR LRLSPGSRVT GTRPTGYLGH
VTRMVVEKPS RELEIESRFR IRVDRPVPMP LPGDATVAEV AAAARVTLDI GVESPANFIY
PSPSIPLSAA ITAWCSELLD PDRGVVEAGL ALATRIHDRF TYDGSATTVD TSPAEAFEKR
HGVCQDFAQI MIAGLRGVGV PAAYVSGYLR TIPPPGQPRL VGADATHAWV VIWCGAERGW
LGFDPTNACL VGSDHIVTAM GRDYADVAPI DGVFTGQEGQ KIDVAVDVEP VG
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