| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4716 |
|---|
| Symbol | |
|---|
| ID | 5196665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 5184496 |
|---|
| End bp | 5185344 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640584270 |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase [carboxylating] |
|---|
| Protein accession | YP_001265191 |
|---|
| Protein GI | 148557609 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.162774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCA CTCTTCCCGA TTTCGACCTC GACGCCTTCG TTCGCGCGAC CCTTGCCGAG
GATCTGGGGC AGGGGGGCGA CATCACCTCC GCCGCGACGA TCCCGGCCGA GGCGCTGTTC
GAGGGCGAGA TGGCGAGCCG CGACGCGATC AGCGTCGCCG GCCTGCCGAT CGCCGAAGCC
TTCTTCCGCG CGCTCGACCC CGCCGTCGAG ATCGAGACGC TGGTCGCGGA CGGCGTCCGC
GTCGCCAAGG GCGGGGTGCT GATGCGCCTG CGCGGCAAGG CGCGCGCGCT GCTGACCGCC
GAGCGGTCGG CGCTCAACAC CATCCAGCAC CTGTCGGGCG TGGCGACGCT GGCCAGCGCC
TATGTCGACG CGATCGCCGG CACCGGCGCG ATCCTGCTCG ACACCCGCAA GACCATCCCC
GGCCTGCGCG TGCTGGAGAA ATATGCGGTG CGCATGGGCG GCGGCACCAA CCATCGGATG
CGGCTCGACG ACGCGGCGAT GATCAAGGAC AACCATGTCG CGGTCGCCGG CAATATCGCA
GAGGCGGTCC GCCGCGCGGT CGCCGCGGGC ATCGAACGGA TCATCGTCGA GGTCGACCGG
GTCGACCAGA TCGAGCCGGC GCTGGCTGCC GGCGCCACCC ACCTGCTGCT CGACAACATG
GACCCGCCGA CACTGCGCGG CGCGGTGACG CTGGTCGGCG GCCGGGTGCC GACCGAGGCG
TCGGGCGGGG TGCGGCTCGA CACGATCAAG GCGATCGCGC AGACCGGTGT CACCTATGTC
TCGGTCGGGC GGCTGACCCA GTCGGCCCCG GCCGCCGACA TCGGGCTGGA TTTCCGTCCG
CTTCCCTGA
|
|---|
| Protein sequence | MTFTLPDFDL DAFVRATLAE DLGQGGDITS AATIPAEALF EGEMASRDAI SVAGLPIAEA
FFRALDPAVE IETLVADGVR VAKGGVLMRL RGKARALLTA ERSALNTIQH LSGVATLASA
YVDAIAGTGA ILLDTRKTIP GLRVLEKYAV RMGGGTNHRM RLDDAAMIKD NHVAVAGNIA
EAVRRAVAAG IERIIVEVDR VDQIEPALAA GATHLLLDNM DPPTLRGAVT LVGGRVPTEA
SGGVRLDTIK AIAQTGVTYV SVGRLTQSAP AADIGLDFRP LP
|
|---|
| |