Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4686 |
Symbol | |
ID | 5198421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5154109 |
End bp | 5155266 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640584240 |
Product | phosphoserine aminotransferase |
Protein accession | YP_001265161 |
Protein GI | 148557579 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0966475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.103743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATA TTGCTCGCCC GGCTTCCAAG CCGGCACGTC CCCATTTCTC TTCCGGCCCC TGCGCTAAGC CGCCCGGCTG GTCCCCCGAA AAACTCGCTA CCGGATCGCT CGGCCGTTCG CATCGGTCGA AGCTCGGCAA GGCGCGCATC AACCATGCCG TCGACCTGAC CCGCGAGATC CTGGGCGTCC CCGCCACCCA TCGCATCGGC ATCGTCCCCG GATCGGACAC CGGCGCGGTC GAGATGGCGC TGTGGAGCCT GCTCGGCGCG CGCAAGGCCA CGATGGTCGC TTGGGAGAGC TTCGGTGAGG GTTGGGTCAC CGATGTCGTC AAGCAGCTCA AGATCGAGGC CGACGTGGTC AAGGCGCCCT ATGGCAGCCT CCCCGACCTC GCCGCGCTCG ACCAGTCGAC CGACATCGTC TTCACCTGGA ACGGCACCAC CTCGGGCGTG CGCGTTCCGA ATGGCGACTG GATCAGGGAC GATCGCGAGG GCCTGACCAT CGCCGACGCG ACCTCGGCCT GCTTCGCGAT GGACCTGCCC TGGGACAAGC TCGACGTCGT CACCTTCTCC TGGCAGAAGG TGCTGGGCGG CGAAGGCGCG CACGGCATCC TGGTGCTCGG CCCCCGCGCG GTCGAGCGGC TGGAGAGCTA CACCCCGGCC TGGCCGCTGC CGAAGATCTT CCGCATGACC AAGAGCGGCA AGCTGATCGA GGGCATCTTC AAGGGCGAGA CGATCAACAC GCCGTCGATG CTGGCGATCG AGGATTATAT CCACAGCCTC GAATGGGCGA AGTCGATCGG CGGCCTGGAC GCGCTGATCG CCCGCGCCGA CGCCAACACC GCGGCGCTCG ACGCCTGGGT GCAGCGGACC GACTGGATCG ACCATCTCGC GGCCGACCCG GCCTCGCGCT CGAACACCTC GGTCTGCCTG AAGTTCGCGG ACGGCGCGGT CGAGGGTCTC GACGACGAAG CGAAGCTCGC CCTCGTCAAG AAGATCGCCG GCGCGCTCGA GCTCGAGGAC GCGGCCTATG ACGTCGCCGG CTATCGCGAT GCGCCTCCGG GCCTGCGGGT CTGGTGCGGC GGCACCGTCG AGACCGCCGA CGTCGAGGCG CTCGGCCCCT GGCTCGACTG GGCCTGGGCC CAGGCCCGCG CGGCGTAA
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Protein sequence | MTDIARPASK PARPHFSSGP CAKPPGWSPE KLATGSLGRS HRSKLGKARI NHAVDLTREI LGVPATHRIG IVPGSDTGAV EMALWSLLGA RKATMVAWES FGEGWVTDVV KQLKIEADVV KAPYGSLPDL AALDQSTDIV FTWNGTTSGV RVPNGDWIRD DREGLTIADA TSACFAMDLP WDKLDVVTFS WQKVLGGEGA HGILVLGPRA VERLESYTPA WPLPKIFRMT KSGKLIEGIF KGETINTPSM LAIEDYIHSL EWAKSIGGLD ALIARADANT AALDAWVQRT DWIDHLAADP ASRSNTSVCL KFADGAVEGL DDEAKLALVK KIAGALELED AAYDVAGYRD APPGLRVWCG GTVETADVEA LGPWLDWAWA QARAA
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