| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4675 |
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| Symbol | |
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| ID | 5200890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5142197 |
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| End bp | 5143495 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584229 |
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| Product | general substrate transporter |
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| Protein accession | YP_001265150 |
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| Protein GI | 148557568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0145765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.795521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCCG CCGCCCGCCC CCGCAACCCG ATCCGCTCGG TAATCGGCGG GTCGCTCGGC
AATCTCGTCG AGTGGTACGA CTGGTACATC TATTCGGCCT TCTCGCTCTA TTTCGCGAAG
AGCTTCTTCC CGGAGGCCGA TCCCACCGCG CAGCTGCTGT CGACCAGCAT CGTCTTCGCG
ATCGGCTTCC TGATGCGCCC GCTCGGCGGC TGGCTGCTCG GTATCCTGGC CGACCGCTAC
GGGCGCAAGA CCGCGCTGAC CTGGTCGATC ACGCTGATGT GCGCGGGGTC GCTGATCATC
ACCTGCGCGC CGACCTATGC CTCGATCGGC ATCTGGGCGC CGCTGCTGCT CACCTTCGCG
CGCATGGCGC AGGGGCTGAG CCTGGGCGGC GAGTTCGGCA CCGCGGCGAC CTACCTGACC
GAGATCGCCC CGCCCGACCG GCGCGGCTTC TGGTCGAGCT TCCAATATGT CACGCTGATC
GCGGGCCAGC TCCTCGCGCT CGGCCTGCTG GTCGTGCTGC AATTCCTGTT CCTCGACGAG
GCGCAGCTCG AAGCCTGGGG CTGGCGGCTC GCCTTCGCGA CCGGCGCGGT GCTGGCGATC
AGCGTCTTCT GGCTGCGGCG CGGGATCGAC GAGACCCCCG ACTTCATCGA GGAGACGGCG
GGCGAGCGGC GCAAGGGCGG CCTCGTCGCC CTGCTGCGCG AGCGGCCCAA GCAGGTGGCG
CTGGTGTTCG GCCTGTCGAT CGGCAGCAAT GTCAGCTTCT ACGCCTTCAC CACCTATATG
CAGAAATATC TGGTCGCGAG CGCGGGCTTC GCCAAGGACC TGACCTCGCT GATCTGCTCG
GGCGCGCTGA TCTTCTACAT CGTCATCCAG CCGATGCTCG GCGCGCTGTC CGACCGGATC
GGGCGCAAGC CGCTGCTCTA CTGGTGCTGG ATCGGCGGCA TCGTCGCGAC CGTGCCGCTG
TTCACCGCGC TGGGCGCCGC CACCAGCGGG CTGGAGGCGT TCCTGCTGCT CTGCGTCGCC
TATCTGATCA TCTCCGGGTC GAGCGCGACC AGCGCGGTGG TGAAGGCCGA GCTGTTCCCG
CCGCACGTCC GCGCGCTCGG CGTCGGCCTG CCCTATGCGG TCAGCCAGGC GATCTTCGGC
GGCACCGCGG AGTCGGTCGC GCTCGGCTTC AAGGCGGCGG GCGTCGAATC CGCCTTCTTC
TGGTACGTCA CCGGCTGCAT GGCGGTGGCG CTGGTGACGA CCTTCTTCGT GCCCGAGACG
CGCTGGCCCG GCGGCCGGCG GCCGACGCGC GGCGCCTGA
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| Protein sequence | MSAAARPRNP IRSVIGGSLG NLVEWYDWYI YSAFSLYFAK SFFPEADPTA QLLSTSIVFA
IGFLMRPLGG WLLGILADRY GRKTALTWSI TLMCAGSLII TCAPTYASIG IWAPLLLTFA
RMAQGLSLGG EFGTAATYLT EIAPPDRRGF WSSFQYVTLI AGQLLALGLL VVLQFLFLDE
AQLEAWGWRL AFATGAVLAI SVFWLRRGID ETPDFIEETA GERRKGGLVA LLRERPKQVA
LVFGLSIGSN VSFYAFTTYM QKYLVASAGF AKDLTSLICS GALIFYIVIQ PMLGALSDRI
GRKPLLYWCW IGGIVATVPL FTALGAATSG LEAFLLLCVA YLIISGSSAT SAVVKAELFP
PHVRALGVGL PYAVSQAIFG GTAESVALGF KAAGVESAFF WYVTGCMAVA LVTTFFVPET
RWPGGRRPTR GA
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