Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4672 |
Symbol | |
ID | 5198657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5139463 |
End bp | 5140986 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640584226 |
Product | fumarase |
Protein accession | YP_001265147 |
Protein GI | 148557565 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0151007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.629032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA TCATCAAGGA AGCCGACCTG ATCGAGAGCA TCGCCGATGC CCTCCAGTAC ATCAGCTATT ATCACCCGAT GGATTACATC AAGGCGCTGG GCGCGGCCTA TGAGGCCGAG CAGGGGCCGG CCGCCAAGGA CGCGATCGCG CAGATCCTGA CCAACAGCCG GATGTGCGCC GAGGGGCATC GGCCGATCTG CCAGGATACC GGCATCGTCA CCGTCTTCAT CAAATGGGGC CAGCAGTGCA TGCTGGACTC GGAGAAGAGC CTGCAGGAGG TCGTCGACGA GGGCGTCCGC CGTGCCTATC TCCACCCCGA GAACCGGCTG CGCGCCTCGA TCCTGCGCGA TCCCGCCTTC AGCCGGGTCA ACACCAAGGA CAACACGCCG TCGGTGATGA ACGTCGAGAT GGTGCCCGGC CACCATGTCG AGGTCGCGGT CGCGGCCAAG GGCGGCGGTT CGGAGAACAA GTCGAAATTC GCGATGCTCA ACCCGTCGGA GTCGATCGTC GACTGGGTGC TCGAGATGAT CCCGAAGATG GGCGCCGGCT GGTGCCCGCC CGGAATGCTC GGCATCGGCA TCGGCGGCAC CGCCGAGAAG GCGATGACGA TGGCCAAGGA GTCGCTGATG GGCGACATCG ACATGGCCCA GCTCAAGGCG CGAGGGGCCC AGAACGACAT CGAGAAGCTG CGCATCGAGA TCTTCGACAA GGTCAACGCG CTCGGCATCG GCGCGCAGGG CCTGGGCGGC CTGTCGACCA TCCTCGACGT CAAGATCATG GACTATCCGA CCCATGCGGC ATCGAAGCCG GTGGCGATGA TCCCGAACTG CGCGGCGACC CGCCATGCGC ATTTCCACCT CGACGGATCG GGGCCGGCCT ATCTCGACCC GCCGAGCCTC GACGAATGGC CCAAGGTCGA ATGGGCGCCG TCGAAGGAGT CGATCCGCGT CGACCTCGAC ACGCTGACGC CCGAGGTGGT GGCAAGCTGG AAGCCGGGTG ACCGCCTGCT GCTCAACGGC AAGATGCTCA CCGGCCGCGA CGCCGCGCAC AAGCGCATCC AGGACATGCT GGCCAAGGGC GAGGAGCTGC CGGTCGATTT CAAGGGCCGC GTGATCTATT ATGTCGGCCC GGTCGATCCG GTGCGCGACG AGGTCGTCGG CCCGGCGGGC CCGACCACCG CGACGCGGAT GGACAAGTTC ACCGAGATGA TGCTCGACCA GACCGGCCTG ATCGCGATGG TCGGCAAGGC CGAGCGCGGC CCGACGGCGA TCGAGGCAAT CCGCAAGCAC AAGGCCGCCT ATCTGATGGC GGTCGGCGGC GCCGCCTATC TGGTCGCCCG CGCGATCAAG GGCGCCAAGG TCGTCGGCTT CGCCGACCTC GGCATGGAGG CGATCTACGA GTTCGACGTG AAGGACATGC CGGTCACCGT CGCGGTCGAC GCGACCGGCG AGAGCGTCCA CCACACCGCC CCGCTCGTCT GGCGCGAGAA GATCGCGCGG GAGAAGCTGC TCGAGAATGC GTGA
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Protein sequence | MTVIIKEADL IESIADALQY ISYYHPMDYI KALGAAYEAE QGPAAKDAIA QILTNSRMCA EGHRPICQDT GIVTVFIKWG QQCMLDSEKS LQEVVDEGVR RAYLHPENRL RASILRDPAF SRVNTKDNTP SVMNVEMVPG HHVEVAVAAK GGGSENKSKF AMLNPSESIV DWVLEMIPKM GAGWCPPGML GIGIGGTAEK AMTMAKESLM GDIDMAQLKA RGAQNDIEKL RIEIFDKVNA LGIGAQGLGG LSTILDVKIM DYPTHAASKP VAMIPNCAAT RHAHFHLDGS GPAYLDPPSL DEWPKVEWAP SKESIRVDLD TLTPEVVASW KPGDRLLLNG KMLTGRDAAH KRIQDMLAKG EELPVDFKGR VIYYVGPVDP VRDEVVGPAG PTTATRMDKF TEMMLDQTGL IAMVGKAERG PTAIEAIRKH KAAYLMAVGG AAYLVARAIK GAKVVGFADL GMEAIYEFDV KDMPVTVAVD ATGESVHHTA PLVWREKIAR EKLLENA
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