| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4660 |
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| Symbol | |
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| ID | 5197616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5127708 |
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| End bp | 5128925 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640584214 |
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| Product | 23S rRNA (uracil-5-)-methyltransferase RumA |
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| Protein accession | YP_001265135 |
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| Protein GI | 148557553 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.63698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG AGGCAGTGAA GGACTGGGAG CCGATCGTCC GCATCGCCGC CCGCGGCGAG
GGGATCACCG CCGACGGCCG CCATTCGCCG CTGTCGGCGC CGGGCGACCT GCTCGGGCTC
GACGGCAGCC TGCAATGGGG GCCGCACCAT GTCGAGCCGC CGTGCCGCCA TTTTCCCAAA
TGCGGCGGCT GCCAGCTCCA GCAGGTCGAC GACCAATCCT ATGCCGATTT CCTCGGCCAG
CGGATCACCG GCGCGCTGGC CCAGCAGAAG ATCGACGCGC CGCCGCTGGC GCCTGCCGCG
CTGTCCGCGC CCGGGACGCG CCGCCGCGCC TCGCTCCACG CCGAACGACA GGGCAAGCGG
ATGCTGCTCG GCTTCAACGA GGCGCAGAGC CACCATATCG TCGACCTGCG CATGTGCGCG
GTCCTCGATC CGAAGCTGTT CGCGCTGGTC GATCCGCTGC GTCGGCTGCT CCACCCGATG
CTGCGCGACC GGCGCGCGGC GGGGGTGCAG ATGACGCTGG TCGACCAGGG CGTCGACCTG
CTGATCGAAA AGGTCGAGGT CGACGGGCTC GCCGCGATCG AGGGACTCAA TGATTTCGCG
CAGGCGCATG GCCTCGCGCG GCTGTCGGTC GACGACGGCT ACGGCCCGCA GCCGCGCTGG
GAGCCCGAGC CGGCGACGGT GACGCTGGGC GGCGTCGCGG TGCCTTTCCC GGCGGGCGGC
TTCCTCCAGG CGACCGCCGA GGGCGAGGCG GCGCTGCTCG CCGAGGTCGA GGCGATCGTC
GGCGACGCCC GGCTGGTCGC CGATCTCTTC GCCGGGCTCG GCACCTTCTC CCTCCCGCTG
GCGCGGACGC GGCGCGTCTA TGCGGCCGAG GGCGCGCGTG ACGCGGTGCT GGGGCTGAAG
GCGGCGGCCG ACCGCAGCCA GCGGATGATC GGCATCGACC ATCGCGACCT GTTCCGCCGG
CCGCTCGACG CCGCCGAACT CGACCGCTTC GACGTGGTCG TGCTCGATCC GCCCCGCGCG
GGCGCCAGGG AACAGATGCC CGCGCTTGCC GCGACGACGA AGGTGCGGCG GATCGCCTAT
GTCTCGTGCA ACCCCTCCAC CTTCGGCCGC GACGCGCGGA CGCTGGTCGA GGGCGGCTGG
CGGCTGGAGC GGATCACGCC GGTCGGCCAG TTCCGCTGGT CGACCCACAC GGAACTGGTG
GCGGCGTTCG CACGGTAG
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| Protein sequence | MSDEAVKDWE PIVRIAARGE GITADGRHSP LSAPGDLLGL DGSLQWGPHH VEPPCRHFPK
CGGCQLQQVD DQSYADFLGQ RITGALAQQK IDAPPLAPAA LSAPGTRRRA SLHAERQGKR
MLLGFNEAQS HHIVDLRMCA VLDPKLFALV DPLRRLLHPM LRDRRAAGVQ MTLVDQGVDL
LIEKVEVDGL AAIEGLNDFA QAHGLARLSV DDGYGPQPRW EPEPATVTLG GVAVPFPAGG
FLQATAEGEA ALLAEVEAIV GDARLVADLF AGLGTFSLPL ARTRRVYAAE GARDAVLGLK
AAADRSQRMI GIDHRDLFRR PLDAAELDRF DVVVLDPPRA GAREQMPALA ATTKVRRIAY
VSCNPSTFGR DARTLVEGGW RLERITPVGQ FRWSTHTELV AAFAR
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