Gene Swit_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4610 
Symbol 
ID5199080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5068385 
End bp5069143 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID640584165 
ProductXRE family transcriptional regulator 
Protein accessionYP_001265086 
Protein GI148557504 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.985679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGCC CGGTGCACAT CATCGCGGAA GCGCGGAGCG CTTCCACCTC AGACGATCAG 
GCTCTAGGGA TTTCCCCGGA AACCATGGCG AAAACACCCC GCAACACTTC CCAGCCCGGC
CCCGCGCTCC GCGCCGCGCG CCTCGACAAG GGGCTGAGCC TGCGCGAGCT CGCCGCCCGG
ACCGGCCTGC CCTTCTCGAC CCTGTCCAAG CTCGAAAACG GCAAGATGGG GATGACCTAT
GACAGGCTGG TGCTGCTGGC CCAGGCGCTG GGCGTCGAGA TCGGCAAGCT CTTCTCCACC
GCCGCGCCCG ACGAGCCCGC CCGCGGCGCG GTCGGCCGGC GAAGCATCAT CCGGGCGGGG
GAGTGGCCCG AATCGAGTTC GGAGCGCTAT CGTCACCATT ATCTGGCGGC CGATCTGCTC
GACAAGATGA TGGTCCCGAT GATCATCGAG GTGGAGGCCC GCACCCTGGA GGAATATCGC
GGGATCGCCC GGCACGAGGG CGAGGAATAT CTGTACGTCC TGTGCGGCGC GATGGAGCTG
CACTCCGATC TTTACGCGCC GCTGCGCCTC GAACAGGGCG ACTCGATCTA TTTCGACAGC
GGCATGGCGC ATGCCTATGT CCGCGTCAGC GACGGCCCCT GCCGGCTGCT GTCGATCTGC
GCCGGCGCCG GGATACAGCG CTTCGTCGAA ACCGCCAATC ATCGCTGGGA CAAAGCCCCG
CCCGGCGAGG CGGATGCGGG CGACGGCCCG GACGGATGA
 
Protein sequence
MKSPVHIIAE ARSASTSDDQ ALGISPETMA KTPRNTSQPG PALRAARLDK GLSLRELAAR 
TGLPFSTLSK LENGKMGMTY DRLVLLAQAL GVEIGKLFST AAPDEPARGA VGRRSIIRAG
EWPESSSERY RHHYLAADLL DKMMVPMIIE VEARTLEEYR GIARHEGEEY LYVLCGAMEL
HSDLYAPLRL EQGDSIYFDS GMAHAYVRVS DGPCRLLSIC AGAGIQRFVE TANHRWDKAP
PGEADAGDGP DG