| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4597 |
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| Symbol | |
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| ID | 5197820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5050348 |
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| End bp | 5052654 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640584151 |
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| Product | isoquinoline 1-oxidoreductase |
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| Protein accession | YP_001265073 |
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| Protein GI | 148557491 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTG CAGTGGTCTC GCACATTCGG CCCGCCTATC ATGGTCGCAT GCATGCACGG
ATCGAGCGGG AGGATGGGGT GAACAAGCCC CGGCGCGGCG TCACCCGGCG CAGTCTGCTG
GTCGGCGGCG GCGCGGCGGC GGGGCTGGTG CTGGGCTGGG CGGTCTGGCC GCGCCGCTAT
GGGCCCAATC TCGCGCTCGG GCCGGGCGAG CAGCTTTTCA ACGCCTTCCT CAAGATCGCG
ACCGACGGCC GGGTGATCGT CGCGGTGCCG CAGGCGGAGA TGGGGCAGGG CGTCTACACT
TCCATGCCGC AGATACTGGC CGACGAACTG GGCGCCGACT GGCGCACGGT CGGCGTCGAG
CCGGCGCCGA TCAACCCGGT CTACGCCAAC ACCCTGCTGG CCGAGGAGCA GGCGCGCGAG
CAGCTTCCCG CCTGGCTGCA CGGGCCGGGC GAATGGGTCG CGCGCGAGGT CGCGATCCGC
ATGAACCTCA CCATCACCGG CGGCTCCTCC TCGATCCGTT CGTTCGAGAC GCGCCTGCGC
GAGGCGGGCG CGGCGGCGCG CAGCCTGTTG TGCATGGCGG CGGCGGACCG CTGGGGGATC
GACTGGAAGG CGTGCGACAC CGAGGCCGGC TTCGTCGTGC GCGGCGACGA CCGGCTGGCG
TTCGGCACAT TGGCCGAGGC CGCCGCGCGG CTGACCCCGC CCGACGATCT GCGGCTGCGG
GACCGGGACG AACGGACGCT GGTCGGCCGG CCGGTGCCGC GCCTCGACCT GCCGGCCAAG
GTCGACGGCA GCGCGCAGAT GGGCGCCGAC ATCCGGCTGC CGGGCATGGT CTACGCCTCG
ATCGCGCACG GCCCCTATGG CGACGCGCAT CCCGTGAAGA TGGCGACCGC CGCGGCCGAC
GAGACGCCCG GCGTGATGGC GGTGCTCACC AATCCCGGCT GGGTCGCCGT GGTCGGCACC
AATTGGTGGG CGGCCGATCG CGGGCTGGAA GCGCTGGCGG TCGAGTTCGA GACGCGTTCG
CCTCGCCCCG ACGACGGCAC CGTGCGCCGC GCGCTGGCCG CCGCGCTCGA CAAGGGCGAG
GCGAAGCGCT TCGTCGAGCA TGGCGATCCC GATGCGGCGC TGGCCGGGCA GGGCGTGGTC
GCCGCCGCCT ATTCGGTGCC GATGATCGCC CATGCGGCGC TGGAGACGCT GACCGCGACC
GCGCGCTTCG GCGATGGCGG GGTCGAGGTC TGGGTGCCGA CCCAGGCCGC GCCGATGGCC
CGCGCCGCCG TGGCGCGAGC GGTCGGCCTC GACGAGGGGC GGGTGACGAT CTACCCGACG
CTGGTCGGCG GCGGCTTCGG CCGCAAGACC GAGGTGCAGG CGGCGGTCGA GGCGGCGATC
ATCGCGTCCA AGGTCCGCAA GCCGGTCCAG CTCGTCTGGC CGCGCCGCGA GGATATCCAG
CACGGCCGCT TCCGCCCGCC CGCGACCGCG CGGCTGAAGG CGAAGCTCGG CCCGGCCGGG
GCGATCGCCG GCTGGTCGGC GCGGATCGCC GCGCCCTCGA CCAATGCCGA GATGATGGCG
CGGCTGACCG GCGGCGCGCA GAAGTCCAGC TACGGCCCCG ACCGCGGCGT GGTCGAGGGC
GCCGCGCCGC CCTATGCGAT CGCGGCGCTG GCGGTCGAGC ATGTCGAGGC GGTGACCGGC
GTGCCGACCG GCGCCTGGCG GTCGGTCGCC AACAGCTACA CCGCCTTCTT CACCGAGAGC
TTCGTCGACG AGCTGGCGCT GGTCGCCGGG CTCGATCCGC TGTCCTTCCG CATGCAGGCC
TTGAGCGGCC AGCCCCGCCT CGCCCGCTGC CTGCAGATGG CGGCGTCGAT CGGCGCGTGG
CAGGGCGGGG AGCCCGGCAC CGGCCAGGGG CTGGCGGCCC ATAGCTGCTT CGGCAGCCAT
GTCGCGATGC TGGTCGAGGC GCGGATCGAG GGCGACCAGG TCAAGGTGCC CAACGTCACC
GCCGTCGTCG ACATCGGCCG CACGATCCAC CCCGACATCG TCCGTCAGCA GGTCGAGGGC
GGCATCTTGT GGGGGCTGGC CAACGCGTTC GGCAACGGCA TCTCGATCCG CGAGGGGATC
GTGACCGCGC AGAATTTCGA CGGGCTGGGC CTGCCCGACC TCATGTCGAC GCCGGAGATA
CGGGTCGAGA TCATCCCCTC CGAGCTGCCG CCCGGCGGCG CGGGCGAGAT CGCGGTGCCG
CCGGTCGCCC CGGCCGTCGC CAACGCGATC TTCGCCGCGA CCGGCAAGCG CCTCCGCCAC
CTGCCGCTGA GGCTGTCCGA CACATGA
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| Protein sequence | MTIAVVSHIR PAYHGRMHAR IEREDGVNKP RRGVTRRSLL VGGGAAAGLV LGWAVWPRRY
GPNLALGPGE QLFNAFLKIA TDGRVIVAVP QAEMGQGVYT SMPQILADEL GADWRTVGVE
PAPINPVYAN TLLAEEQARE QLPAWLHGPG EWVAREVAIR MNLTITGGSS SIRSFETRLR
EAGAAARSLL CMAAADRWGI DWKACDTEAG FVVRGDDRLA FGTLAEAAAR LTPPDDLRLR
DRDERTLVGR PVPRLDLPAK VDGSAQMGAD IRLPGMVYAS IAHGPYGDAH PVKMATAAAD
ETPGVMAVLT NPGWVAVVGT NWWAADRGLE ALAVEFETRS PRPDDGTVRR ALAAALDKGE
AKRFVEHGDP DAALAGQGVV AAAYSVPMIA HAALETLTAT ARFGDGGVEV WVPTQAAPMA
RAAVARAVGL DEGRVTIYPT LVGGGFGRKT EVQAAVEAAI IASKVRKPVQ LVWPRREDIQ
HGRFRPPATA RLKAKLGPAG AIAGWSARIA APSTNAEMMA RLTGGAQKSS YGPDRGVVEG
AAPPYAIAAL AVEHVEAVTG VPTGAWRSVA NSYTAFFTES FVDELALVAG LDPLSFRMQA
LSGQPRLARC LQMAASIGAW QGGEPGTGQG LAAHSCFGSH VAMLVEARIE GDQVKVPNVT
AVVDIGRTIH PDIVRQQVEG GILWGLANAF GNGISIREGI VTAQNFDGLG LPDLMSTPEI
RVEIIPSELP PGGAGEIAVP PVAPAVANAI FAATGKRLRH LPLRLSDT
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