Gene Swit_4588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4588 
Symbol 
ID5197871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5044069 
End bp5044668 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content68% 
IMG OID640584142 
Producthypothetical protein 
Protein accessionYP_001265064 
Protein GI148557482 
COG category 
COG ID 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCC GCACCCTCTT CGTCACCCGC CTCTACGAGG CGATGATCGA CAATCCCGCG 
CTGATCGAGG AGCTGGAGGA CTCGGTCCGC ATGCTCGCGA CGGATGACCG CGCGGGCCAG
GGCTGGTCGA AGGCGCACGG CTATCGCGGC TACACCTCCT ATGCGTCGCT CAACGACCTG
CCCGCGCGCG ATCCGGTGAT CGCCGATCTC GTGAAGCTGC TCAACGGCCA TGTCCGCCGC
TTCGCCGAGG AGTCGCATCT CGACCTCGGC CGCCGGCTCC GGCTCGACAG CCTGTGGGTC
AACCTGATGA AGCCGGGCGC GACCCATTCG GGCCATATCC ACCCGCACAG CGTGATCTCC
GGCACCTTCT ACGTCTGCGT GCCGCCGGGA TCGGGCGGGC TGAAGCTGGA GGACCCGCGC
CTGCCGCTGA TGATGGCCGC CCCGCCGCGC ACCCCCGACG CGCCCGAGGA CAGCCGCAGC
TTCGTCTATG CCGAGCCGAA GCCCGGCATG GTCCTGCTCT GGGAAAGCTG GCTGCGCCAC
GAGGTGCCGC CCAGCACAGC CAAGGGCGAC CGGATCAGCA TCAGTTTCAA CTATAGCTGA
 
Protein sequence
MAIRTLFVTR LYEAMIDNPA LIEELEDSVR MLATDDRAGQ GWSKAHGYRG YTSYASLNDL 
PARDPVIADL VKLLNGHVRR FAEESHLDLG RRLRLDSLWV NLMKPGATHS GHIHPHSVIS
GTFYVCVPPG SGGLKLEDPR LPLMMAAPPR TPDAPEDSRS FVYAEPKPGM VLLWESWLRH
EVPPSTAKGD RISISFNYS