| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4553 |
|---|
| Symbol | |
|---|
| ID | 5196772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 5009650 |
|---|
| End bp | 5011476 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640584106 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_001265029 |
|---|
| Protein GI | 148557447 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.365808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCA TTATCGGCAT ATTGGGCAAG GAAGACGTTG CGGGGCGGCT GCTCGAAGGG
CTGCGGCGGC TCGAATATCG CGGCTATGAT TCGGCGGGCA TCTGCACGAT CCACGATGGC
GCGCTCGATC GCCGCCGCGC CGAGGGCAAG CTCGACAATC TCGCGAAGAA GCTGGCGGCG
GAGGCGCTGC CCGGGGTGAT CGGCATCGCC CACACCCGCT GGGCGACCCA TGGCGCGCCG
ACCCAGGACA ATGCCCACCC CCATGCGACC GGCGAGGTGG CGCTGGTCCA CAACGGCATC
ATCGAGAATT TCAAGCCGCT CCGCGACGAG CTGATCGCCA AGGGCCGCAC CTTTGAGAGC
CAGACCGACA CCGAGGTCGT GGCCCACCTG ATCTCCGCCG ACGTCGAGGC GGGGATGGAC
CCGGTCGAGG CGGTGCGGAC CAACCTCAAG CGGCTGCATG GCGCCTTCGC GCTGGCGATC
CTGTTCCGCC AGAACCCGGA CATGCTGATC GGCGCGCGGC TCGGCTCGCC GCTGGTCGTC
GGCTATGGCG AGAATGGCGA GACCTATCTC GGCTCCGACG CGCTGGCGCT CGCCCCGCTC
ACCCAGAAGA TCGCCTATCT CGAGGAGGGC GACTGGGTCG TCATCACCCG CGAGAAGACC
CAGATCTACG ACCGCGACGA CCAGCCGGTC GAGCGCGCCG TCGTCCATTC GGGCGTGTCG
AGCCTGTCGA TCGACAAGGG CAACCACCGC CATTTCATGC TCAAGGAGAT CTACGAGCAG
CCGATCGTGG TGGCGCAGAC GCTGAAGTCC TACGTCCGCC GCCTGGAGGA GCAGGTGTCG
CTGCCGATCC CCGACTTCGA CCTGGGCGCG ATCCGCCGCG TGTCGATCGT CGCCTGCGGG
ACGAGCTTCT ATGCCGGCAT GGTCGCCAAA TACTGGTTCG AGCAATTCGC CCGCGTGCCG
GTCGACCTCG ATGTCGCATC GGAATTCCGC TACCGCGAGC CGGTGATGGA GGACGGCGGC
CTCGCCCTGT TCATCAGCCA GTCGGGCGAG ACCGCCGACA CGCTGGCGGC GCTGCGCCAC
GCCCGATCGG AAGGGCAGAA GATCGCGGTG GTGGTCAACG TCCCCACTTC GACCATGGCG
CGCGAGGCGG ACCTGCTGCT GCCGACCCAT GCCGGGCCCG AGATCGGCGT CGCCTCGACC
AAGGCCTTCA CCTGCCAGCT CGCGGTGCTC GCCGCGCTCG CCGCCAATCT GGCGCGGGCC
AAGGGCCGGC TCGACGCCAA GGCGGAGAAG GAGATCGTCC GCCACTTGTC GGAGGCGCCA
GCCGCGATCA ACGGTGCGCT CGCCTATGAC GAATCGATCG AGGCGATGGC GAGCGTGATC
GCCGGCGCCC GCGACGTGCT CTATCTGGGC CGCGGGCCGG ACTATCCGCT GGCGCTGGAG
GGCGCGCTCA AGCTCAAGGA GATCAGCTAT ATCCACGCCG AGGGCTATGC CGCCGGCGAG
ATGAAGCATG GGCCGATCGC CCTGATCGAC GAGAATGTCC CCGTCATCGT CATCGCGCCC
AGCGGCCCGC TGTTCGACAA GACCGTGTCG AACATGCAGG AGGTGCAGGC GCGCGGCGGC
AAGGTGGTGC TGATCTCCGA CTATGACGGC ATCCAGGCGG CGGGCGAGAA TTGCATGGCG
ACGATCACCA TGCCGAAGGT CCACCCGCTG ATCGCCCCGA TCGTCTACGC GATCCCGGTC
CAGCTGCTCG CCTATCATGT CGCCGTGGCG AAGGGGACCG ACGTCGACCA GCCCCGCAAC
CTCGCCAAGT CGGTGACGGT GGAATAG
|
|---|
| Protein sequence | MCGIIGILGK EDVAGRLLEG LRRLEYRGYD SAGICTIHDG ALDRRRAEGK LDNLAKKLAA
EALPGVIGIA HTRWATHGAP TQDNAHPHAT GEVALVHNGI IENFKPLRDE LIAKGRTFES
QTDTEVVAHL ISADVEAGMD PVEAVRTNLK RLHGAFALAI LFRQNPDMLI GARLGSPLVV
GYGENGETYL GSDALALAPL TQKIAYLEEG DWVVITREKT QIYDRDDQPV ERAVVHSGVS
SLSIDKGNHR HFMLKEIYEQ PIVVAQTLKS YVRRLEEQVS LPIPDFDLGA IRRVSIVACG
TSFYAGMVAK YWFEQFARVP VDLDVASEFR YREPVMEDGG LALFISQSGE TADTLAALRH
ARSEGQKIAV VVNVPTSTMA READLLLPTH AGPEIGVAST KAFTCQLAVL AALAANLARA
KGRLDAKAEK EIVRHLSEAP AAINGALAYD ESIEAMASVI AGARDVLYLG RGPDYPLALE
GALKLKEISY IHAEGYAAGE MKHGPIALID ENVPVIVIAP SGPLFDKTVS NMQEVQARGG
KVVLISDYDG IQAAGENCMA TITMPKVHPL IAPIVYAIPV QLLAYHVAVA KGTDVDQPRN
LAKSVTVE
|
|---|
| |