Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4540 |
Symbol | |
ID | 5200283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4993778 |
End bp | 4994551 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640584093 |
Product | glucose-1-phosphate cytidylyltransferase |
Protein accession | YP_001265016 |
Protein GI | 148557434 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0266961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAGA TCGCCCTGCT GGCGGGTGGC TTCGGCACGC GCCTGAGCGA GGAGACCGCG ATCCGGCCGA AGCCGATGGT CGAGATCGGC GGTCGCCCGA TCATGTGGCA CATCATGAAG ATCTACGCCC ATTACGGCTA TAAGGACTTC GTCGTGATCG GCGGCTACAA GGTTGAATAT ATCCGAGATT ATTTCCTCAA CTATCGCAGC CGGGCGAGCG ACTTCACGAT CGACCTGAAA TCGGGCGACG TCGACTGGCT GGAGGCGATC GGGGAGGACT GGCGCGTCAC CATCGTCGAC ACCGGTCACG ACACGCTGAC CGGCGGGCGG CTGCTGCGGG CGCGGCATCT GCTCGACGGC GGGCGCTTCG GCCTGACCTA TGGCGACGGC GTCAGCGACG TCGACATCCC GGCGGTGATC GCGGCGCACG AGGCGGCGGG CGCCTGGTGC ACCCTGACCG CCGTGACGCA GCCCGGCCGC TATGGCTCGC TCCGGATCGA CGAGGACGGC CACCGGGTCC AGGGCTTCCG CGAGAAGGGG GCGGCCGACG GCGGCCTGAT CAATGGCGGC TTCTTCGTCT GCGAGCCCGA ACTGCTCGAC CTGATCGACG GCGACCAGAC CACCTTCGAG GCCGAGCCGA TGGACCGGCT GATCGAGCGC GGCAAGCTCG CCAGCTACCA TCATGACGGC TTCTGGCAGA GCATGGATTC ACTGCGCGAC AAGCATCTGC TCGAGGAATT GTGGGCCAAC GGCGCCCCCT GGAAGGTCTG GTAG
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Protein sequence | MRKIALLAGG FGTRLSEETA IRPKPMVEIG GRPIMWHIMK IYAHYGYKDF VVIGGYKVEY IRDYFLNYRS RASDFTIDLK SGDVDWLEAI GEDWRVTIVD TGHDTLTGGR LLRARHLLDG GRFGLTYGDG VSDVDIPAVI AAHEAAGAWC TLTAVTQPGR YGSLRIDEDG HRVQGFREKG AADGGLINGG FFVCEPELLD LIDGDQTTFE AEPMDRLIER GKLASYHHDG FWQSMDSLRD KHLLEELWAN GAPWKVW
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