Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4505 |
Symbol | |
ID | 5196640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4948101 |
End bp | 4950380 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640584058 |
Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
Protein accession | YP_001264981 |
Protein GI | 148557399 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0585827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0585492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGC TGACAGCAAC CTCCGCCGCG CGTGAGATAT TGACGCGCCT GCATGACGTC ATGGCGTCAC GCTCGGCTGC GCAGACCAAG CTCAACCAGG TCGTCCAGAT CATCGGCGAG GCGCTCGATA CCGAGGTCTG CTCGGTCTAC CTGCTGCGCG ACGGCGCGCT GGAGCTGTTC GCCACCCGCG GCCTGAAGCA GGGCGCCGTC CACGTCACCA AGCTGGCGCT CGGCGAGGGC CTGGTCGGGA CGATCGCGCA GAATGTCGAG ACGCTCAACC TCGACGAGGC GACCAGCCAC CCTGATTTCG CCTACAAGCC CGAGACCGGC GAGGAGCTGT TCCACAGCTT CGCGGGCGTG CCGATCGTCC GGCGGGAGCG TGCGGTCGGC GTGCTCGCCG TCCAGCATCG CGACCAGCGC CGGTTCGACG ATGTCGAGAT CGAGGCGCTG CAGACCGTCG CGATGGTGCT GGCCGAGCTG ATCGCCGGCG CCGGCCTGAT CGACGAGGGC GTCCCCGGTT CGAAGGGCAC GCGCGACAAT GGGGCGGTGC GCCTCGCCGG CCTCAAGCTG GTCGAGGGGA TGGCGCGGGG CAGGGCGGTC TATCACCAGC CGCGCATCGA GATCGAGCAT ACCGTCGCCG AGGATATCGA GGTCGAGCGC CACCGCGTCA TCTCCGCCTT CTCGAAGATG CGCGACCAGA TCGAGCGGAT GACCCGCGAG GCCGATTTCG GCGCGGGCGG CGAGCATCAG GACGTCCTCG CGATGTACAA GATGTTCGCC TATGACGAGG GCTGGATCCG GCGGATCAAC GAGGCGATCG ACAGCGGCCT GACCGCCGAG GCGGCGATCG AGCGCGTCCA GCAGCGCACC CGCATGCGGA TGCGCGAGAT CGGCGATCCG CTGCTCGCCG ACCGGATGCA CGACCTGGAG GACCTCTCCA ACCGCCTGCT CCGCATCGTC TCCGGCCAGC TCGGCACGGC GGCGCAGCTC GGCCTGCGCC ATGATTCGAT CCTGATCGCG CGCAACCTCG GCCCCGCCGA GCTGCTCGAA TATGATCGTC GCCGGCTCAA GGGCGTGGTG CTCGAGGAAG GCTCGCTCAC CGCTCATGTC ACGATCGTCG CGCGGGCGAT GGGCGTGCCG GTGCTGGGCC GGGTCAAGGA TGTCCGCCGG ATGATCGGCG AAGGCGACAC GCTGCTGCTC GACGGCACTG CCGGCTCGGT CGTCGTCCGC GCCAATGCGA CCATGGAGGA GGCCTTCGAG GCCAAGATGA TGGTCGGGCA GAAGCGTCGC GCCGAATTCG CGGCGATGCG CGACCTGCCC GCCCGGACCC GCGACGACCT GCGCATCGAG CTGATGGTCA ATGCCGGCCT GCGCGACGAC ATGGCCGCGC TCGACGTCAC CGGCGCCGAC GGCATCGGCC TGTTCCGCAC CGAATTCCAG TTCCTCGTCT CCGCCACGCT GCCGCAGCGC GAGCGCCAGC TCCGCCTCTA TCGCGACGTT CTGGATGCCG CGGGCGACCG GCCGGTGATC TTCCGCACGG TCGACATCGG CGGCGACAAG GCCCTGCCCT ATCTCAAGGC GGGCGACGAT GCGGACGAGG AGAATCCCGC CCTCGGCTGG CGCGCCATCC GTCTCGGCCT CGAACGCGAC GCGCTGATGA AGGTCCAGGC GCGCGCGCTG ATCGAGGCGG CGGCGGGCCG GACCCTCAAC GTCATGTTCC CGATGGTGTC GGAACCGTGG GAGTTCGAGG AGGCCGTCGC GCTGTTCGAT GCGCAGCGCA AATGGATCCA CGATCATGGC CGGGGCGTCC CCAATGCGAT CCGCTACGGC ACGATGCTCG AGGTGCCGGC GCTCGCCGAG AGCCTCGACA TGCTGCTGCC CAGGCTGGAT TTCCTGTCGA TCGGCACCAA CGACCTGACC CAGTTCCTGT TCGCCGCCGA CCGCGCCAAT CCCAAGCTGG CCGAGCGGTA CGACTGGCTG AGCCCCGCGA TCCTGCGCTT CATCGGCCGG GTGACGCGGC AGACGCGCGC GGCGGGCGTG CCGATCGGCG TGTGCGGTGA GATGGGTGGT CGTCCGTTGG AAGCGATGGC GCTGATCGGC CTCGGGATCG ATCGCCTCTC GATCACGCCG GCGGCGGTCG GGCCGGTCAA GGCGATGATC CGTTCGCTCG ACGCGAAGGC GCTGCGCGAA GCGATGGACG GCTTCCTCGG CCGGCCGCTC CGCACCCTGC GCGGCGATCT GGCCGCCTGG GCGGAGAGCA ATGGGGTTGC GGTCGCCTGA
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Protein sequence | MAPLTATSAA REILTRLHDV MASRSAAQTK LNQVVQIIGE ALDTEVCSVY LLRDGALELF ATRGLKQGAV HVTKLALGEG LVGTIAQNVE TLNLDEATSH PDFAYKPETG EELFHSFAGV PIVRRERAVG VLAVQHRDQR RFDDVEIEAL QTVAMVLAEL IAGAGLIDEG VPGSKGTRDN GAVRLAGLKL VEGMARGRAV YHQPRIEIEH TVAEDIEVER HRVISAFSKM RDQIERMTRE ADFGAGGEHQ DVLAMYKMFA YDEGWIRRIN EAIDSGLTAE AAIERVQQRT RMRMREIGDP LLADRMHDLE DLSNRLLRIV SGQLGTAAQL GLRHDSILIA RNLGPAELLE YDRRRLKGVV LEEGSLTAHV TIVARAMGVP VLGRVKDVRR MIGEGDTLLL DGTAGSVVVR ANATMEEAFE AKMMVGQKRR AEFAAMRDLP ARTRDDLRIE LMVNAGLRDD MAALDVTGAD GIGLFRTEFQ FLVSATLPQR ERQLRLYRDV LDAAGDRPVI FRTVDIGGDK ALPYLKAGDD ADEENPALGW RAIRLGLERD ALMKVQARAL IEAAAGRTLN VMFPMVSEPW EFEEAVALFD AQRKWIHDHG RGVPNAIRYG TMLEVPALAE SLDMLLPRLD FLSIGTNDLT QFLFAADRAN PKLAERYDWL SPAILRFIGR VTRQTRAAGV PIGVCGEMGG RPLEAMALIG LGIDRLSITP AAVGPVKAMI RSLDAKALRE AMDGFLGRPL RTLRGDLAAW AESNGVAVA
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