Gene Swit_4501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4501 
Symbol 
ID5198309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4944065 
End bp4944814 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID640584054 
Productmethyltransferase type 11 
Protein accessionYP_001264977 
Protein GI148557395 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.162908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGT TCAAGGATCA TTTCTCGTCG CACGCCGCGG CCTATGCCGC CTATCGTCCG 
GCCTATCCGC CGGAGTTGGC GGCATGGCTG GGCATTGTAG CACCCGCTAC AAAAACAGCG
CTCGACGTCG GCTGCGGGTC GGGACAGCTC TCGCTCCAAC TCGCCGGGCA TTTCGACAGG
GTGATCGCGA CCGACCCGAG CGCGCAGCAG ATCGCCAGCG CCACCCCGCA TCCCAGGATC
GACTATCGCG TCGCCTCGGC CGAGGCGAGC GGCCTGCCGG ACGGATCGGT CGACCTGATC
GCCGCCGCCC AGGCCGCGCA CTGGTTCGAC CTGCCCGCCT TCTTCGCCGA GACCGCGCGG
CTGCTGCGTC CCGGTGGCGT CGTCGCGCTG ATCAGCTATG CCGGCATGGC ACCGCAGGGA
GAGGTCGAGG CGATCGTCGA GCGCTTCCGG GTCGAGACGC TGGCCGAGCA TTGGCCGCCC
GAGCGCGCGC TGGTCGAGAA CGGCTATCGC GACATCCACC TCCCCTTCGA TCCGATCGAG
GCGCCGGCTT TCTCGATCGA GGTGCGCTGG CCGCTCGCCG CGCTGATCGG CTATCTCGAC
ACATGGTCGG CGGTGCGCGC GCTCGAACGC GGCACCGGCC GCGCGCCGTT CGACGCGGTC
GTGGCCGATC TCACCAGGGC CTGGGGCGAT CCGGCGGATA TCCGCACGAT CCGCTGGCCC
CTGACCATCC TTGCTGGACG AAATTCATGA
 
Protein sequence
MSAFKDHFSS HAAAYAAYRP AYPPELAAWL GIVAPATKTA LDVGCGSGQL SLQLAGHFDR 
VIATDPSAQQ IASATPHPRI DYRVASAEAS GLPDGSVDLI AAAQAAHWFD LPAFFAETAR
LLRPGGVVAL ISYAGMAPQG EVEAIVERFR VETLAEHWPP ERALVENGYR DIHLPFDPIE
APAFSIEVRW PLAALIGYLD TWSAVRALER GTGRAPFDAV VADLTRAWGD PADIRTIRWP
LTILAGRNS