Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4478 |
Symbol | |
ID | 5200221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4922156 |
End bp | 4924036 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640584031 |
Product | hypothetical protein |
Protein accession | YP_001264954 |
Protein GI | 148557372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.297343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAACC AACCCTCAAC GCTTTGGGCC TATTCCCTCG ACCCTAGCGA AACATGCGGC GGAGGCGGCC GGTTCCTGCG ATCGGCGGCC GTGGAGATTC GAGTGACCAT CCAGAATGCC AATGCGATCG TCCAGCGGAT CGGCCCCTGC CGGATCGCCC TCGATCAGGC CGCCTTTCCC GAACTGAGCC GCGAATTGGC CCTGATGGGC TGCGAGACGG CCGATATCGC AACCGGCTTC CCGCCCCGGC CGCACGGCCT GACCGCCGGC TTCCTGTCCT GGACCCAGCC TTGCGCGAAC CGGGCCTTCG CCGCCGCGCT TCGCCCGTTC GACGGGATGG ATGTCCTCGT CCTGCAGAGC GACGGACAGG AGCGCCGATC GCTGGAAGGC GATCTCTTCG CGGCAGGCTG GCAGCGGCAC CCCGGGGGCA TGATGCCGGG CGAATATCCC GGCTGGACCG CGGCCACCCT GCCGGGCGTC AGCATCTGGC AGCGGGTGCG CGGCTCGCGC GGCGAGTGGC TGGGCAAGGG CGTCGAGGCC GATGCCCTGA TCGCGCGCTA CGCGACCGCC GCCACCCATG TCCGCCCCGG CGACCGGGTG CTGGTCGACG GTATCGGCGC GGCCGACGGC GCGTCGATCC TGATGGCCTC GTCGCGCGCC GGATCGGTCG TCCGGGTCGA TGATGGACAG ACCAGTGCCG GGGGCGAAAC CGTCAACGAG CGATTCGACC GGCTGGCCGA CGAATCGATC GACCTGATCG TCGCGATCGA ACCCGCCGTG CCGGCCGATT GGCTGGCCCG GCTCGACGAT TATGCACGAC TGCTCAAATA TGACGGCCGT ATCGTGATCG GCTGGCGACA GGGGAACGGC GACGCGAAGC GACCCGCAAG CTGGGAGGAT TTCAGCGACG CCGTATCGGA TCGCTTCCTG CCGGAGAAGC GCTATGTCGA GACCGCGCTC GGCCCGGACC CGCAAGGTGC CCGTGCGATC TTCCCGATCG AGGCCGACCA GGTCGCCGCC ACCGACTGGC TGATGCTCGT CGCGTCGGTC AATCCGCTGC TGGGCGCCGC CCATGCGCAG GGCTACGATC ACCCCGGCTT TCCGCGAGCC CGGGGGCCGC TGCCGGCGCT GGTCGACTTC GGCAGCGCCT ATGACAATCC CTGGCTCTAC CGGTCGATGG TGCAGATGGG CGAGCGGCTT GGCCCCGACG TCAAGCTCGC CCGCCTCGCC GAATGCGTGA TCGAGGATTC GCGTGAGGAT TCGGCGGATC GCGGTGCAGC GATCGCGGTG CTCGGCTATC GGGTGCTGGA GATGCGGCGC GGCGATCTGG CGCTGTCGAT GCTGGCGCTG ATCGAGGCCT ATGTCGGCCT TCCGCTGACC GACGACATGC CGGTCCATGT CCGCCGCTGG CGGATCTCGC TCGCCTTCCT CGCCGGACGG CTCAACGAGC TGGCGGACGA CCGCGCATCC GCGAAGCGCT GGTATCGTGC AGCGGCCGAA GCCGACTGGT CGGGCTTCTC GCCGCTGCTG GCGACCAAGA GCATCGCGGC CACCTTCTTC GAGGCGCGCA TCCATCTCGC CGACGGTGAT CCGCAAACCG CGCTCGCCTG TTTCCGCCAG GGCGCCGATA CCGCGCTCAA GGCGGCGGCC TTCCCGCACG ATCGGCAGAT GGGACCCGAT GGGCAGCCGC TGCCCTTCTA TCTGCAGGAA CTGGCGGAGG TGATCGACAT GGGATCGCAA TGCGCCAATG CGCTGGCCCA TTTCCCGCTC TGGCAGCGCG ATCCGGGCCT GTTCTGGCGC CAGGTCGACA TCCGCCGCTT CGGCCTCGCC TCCTGGGCGC GCGATCTCGA ACGCGAGAAT GAACGGCTGC GGGCGGCCTA G
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Protein sequence | MVNQPSTLWA YSLDPSETCG GGGRFLRSAA VEIRVTIQNA NAIVQRIGPC RIALDQAAFP ELSRELALMG CETADIATGF PPRPHGLTAG FLSWTQPCAN RAFAAALRPF DGMDVLVLQS DGQERRSLEG DLFAAGWQRH PGGMMPGEYP GWTAATLPGV SIWQRVRGSR GEWLGKGVEA DALIARYATA ATHVRPGDRV LVDGIGAADG ASILMASSRA GSVVRVDDGQ TSAGGETVNE RFDRLADESI DLIVAIEPAV PADWLARLDD YARLLKYDGR IVIGWRQGNG DAKRPASWED FSDAVSDRFL PEKRYVETAL GPDPQGARAI FPIEADQVAA TDWLMLVASV NPLLGAAHAQ GYDHPGFPRA RGPLPALVDF GSAYDNPWLY RSMVQMGERL GPDVKLARLA ECVIEDSRED SADRGAAIAV LGYRVLEMRR GDLALSMLAL IEAYVGLPLT DDMPVHVRRW RISLAFLAGR LNELADDRAS AKRWYRAAAE ADWSGFSPLL ATKSIAATFF EARIHLADGD PQTALACFRQ GADTALKAAA FPHDRQMGPD GQPLPFYLQE LAEVIDMGSQ CANALAHFPL WQRDPGLFWR QVDIRRFGLA SWARDLEREN ERLRAA
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